Factsheet for Bra035429.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45893	Canola	golgi, peroxisome, plasma membrane	77.44	96.44
CDY67653	Canola	peroxisome	56.23	92.01
AT1G59740.1	Thale cress	plasma membrane	90.57	91.03
Bra027836.1-P	Field mustard	plasma membrane	88.55	87.23
PGSC0003DMT400053373	Potato	cytosol, peroxisome, plasma membrane	72.05	70.74
KRH51284	Soybean	plasma membrane	67.34	70.55
Solyc01g103030.2.1	Tomato	cytosol, peroxisome, plasma membrane	71.72	70.3
KRH01875	Soybean	plasma membrane	63.3	69.76
VIT_12s0035g01820.t01	Wine grape	golgi, peroxisome, plasma membrane	70.2	68.36
KRH26263	Soybean	cytosol, peroxisome, plasma membrane	69.19	67.16
Bra028002.1-P	Field mustard	peroxisome	63.97	63.33
TraesCS2D01G307400.1	Wheat	plasma membrane	61.45	62.71
TraesCS2A01G309100.1	Wheat	plasma membrane	61.11	62.59
TraesCS2B01G326200.1	Wheat	plasma membrane	61.11	62.59
Zm00001d003603_P001	Maize	plasma membrane	59.26	59.66
EES12219	Sorghum	plasma membrane	59.09	59.59
Os04t0441800-01	Rice	plasma membrane	60.94	59.25
KXG24751	Sorghum	peroxisome, plasma membrane, vacuole	54.04	53.32
Zm00001d049349_P001	Maize	mitochondrion	52.86	43.79
Bra012431.1-P	Field mustard	plasma membrane	17.51	40.78
HORVU2Hr1G076880.23	Barley	golgi, peroxisome	38.72	39.18
Bra010117.1-P	Field mustard	plasma membrane	34.51	36.94
Bra013221.1-P	Field mustard	plasma membrane	31.48	36.24
Bra011937.1-P	Field mustard	plasma membrane	31.31	35.91
Bra013222.1-P	Field mustard	plasma membrane	30.81	35.53
Bra031295.1-P	Field mustard	plasma membrane	34.68	35.27
Bra026991.1-P	Field mustard	plasma membrane	34.68	34.97
Bra023868.1-P	Field mustard	plasma membrane	34.01	34.95
Bra016789.1-P	Field mustard	plasma membrane	34.51	34.75
Bra019744.1-P	Field mustard	plasma membrane	15.66	34.7
Bra012052.1-P	Field mustard	plasma membrane	28.96	33.01
Bra023408.1-P	Field mustard	plastid	31.48	30.06

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	EnsemblPlantsGene:Bra035429	EnsemblPlants:Bra035429.1	EnsemblPlants:Bra035429.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006857	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M4F2X9
InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	ScanProsite:PS01022	PANTHER:PTHR11654
PANTHER:PTHR11654:SF187	InterPro:PTR2_symporter_CS	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI00025448E1	SEG:seg

Description

AT1G59740 (E=3e-303) | proton-dependent oligopeptide transport (POT) family protein

Coordinates

chrA01:+:16359933..16364206

Molecular Weight (calculated)

66161.7 Da

IEP (calculated)

9.769

GRAVY (calculated)

0.220

Length

594 amino acids

Sequence
(BLAST)

001: MEKGNKESKK WAQEEVSNEI NNRELAEEES VDWRGRPSNP SKHGGMRAAL FVLGLQAFEI MGIAAVGNNL ITYVINEMHF PLSKAANSVT NFVGTIFIFS
101: LLGGYLSDAF LGSFWTILIF GFVELSGFIL LSVQAHLSQL KPPKCNPLIN QSSCEEAKGF KAIIFFTALY LVALGSGCVK PNMIAHGADQ FSHQSHPKQS
201: KRLSSYFNAA YFAFSIGELI ALSLLVWIQT HSGMDVGFGV SAAAMTMGLI SLVSGTMYFR NKRPRRSIFT PIAQVVVAAI LKRKLASPAD PKMLNGGHRV
301: PNDVVDSSTL PYTPRLRFLD KACTKIQDTN TKESPWRLCT VNQVEQVKTL ISLVPVFAST IVFNTILAQL QTFSVQQGSS MNTRLSNSFH IPPASLQAIP
401: YIMLIFLVPL YDSLFVPFAR KLTGHSSGIP PLTRIGVGLF LSTFSMVSAA LLEKKRRDSS VLDGRILSIF WITPQFLIFG ISEMFTAVGL IEFFYKQTIM
501: GMESFLMSLT YCSYSFGFYF SSLLVSIVNK ITSTSADSKG WLRENDLNKD RLDLFYWLLA VLSLLNFISY LFWSRWNIKS LRNNNSNVVG DEKI

Best Arabidopsis Sequence Match ( AT1G59740.1 )
(BLAST)

001: MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I

Arabidopsis Description

NPF4.3Protein NRT1/ PTR FAMILY 4.3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.