CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 2
vacuole 2
extracellular 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003603_P001	Maize	plasma membrane	92.19	92.03
TraesCS2A01G309100.1	Wheat	plasma membrane	83.53	84.83
TraesCS2D01G307400.1	Wheat	plasma membrane	83.36	84.36
TraesCS2B01G326200.1	Wheat	plasma membrane	83.02	84.31
Os04t0441800-01	Rice	plasma membrane	84.72	81.67
OQU83190	Sorghum	plasma membrane	66.38	69.08
KXG24751	Sorghum	peroxisome, plasma membrane, vacuole	70.12	68.6
KRH51284	Soybean	plasma membrane	60.95	63.32
KRH01875	Soybean	plasma membrane	57.22	62.52
VIT_12s0035g01820.t01	Wine grape	golgi, peroxisome, plasma membrane	64.01	61.8
PGSC0003DMT400053373	Potato	cytosol, peroxisome, plasma membrane	63.16	61.49
Solyc01g103030.2.1	Tomato	cytosol, peroxisome, plasma membrane	62.82	61.06
KRH26263	Soybean	cytosol, peroxisome, plasma membrane	63.16	60.78
AT1G59740.1	Thale cress	plasma membrane	60.95	60.74
CDY70795	Canola	plasma membrane	32.26	60.13
Bra027836.1-P	Field mustard	plasma membrane	61.46	60.03
Bra035429.1-P	Field mustard	plasma membrane	59.59	59.09
CDY65523	Canola	plastid	31.58	57.41
CDY45893	Canola	golgi, peroxisome, plasma membrane	46.01	56.81
CDY67653	Canola	peroxisome	34.3	55.65
CDY45147	Canola	mitochondrion	31.24	55.42
HORVU2Hr1G076880.23	Barley	golgi, peroxisome	47.71	47.87
EES15876	Sorghum	plasma membrane	36.84	38.61
OQU81850	Sorghum	plasma membrane	35.99	38.55
EES15875	Sorghum	plasma membrane	36.33	37.61
EER89980	Sorghum	plasma membrane	38.2	37.38
OQU87541	Sorghum	cytosol, peroxisome, plasma membrane	38.88	37.36
EES15877	Sorghum	plasma membrane	36.16	37.24
EER91957	Sorghum	plasma membrane	37.35	36.97
EES13374	Sorghum	plasma membrane	37.52	36.77
OQU81851	Sorghum	plasma membrane	34.97	36.59
EES05323	Sorghum	plasma membrane	37.01	36.52
KXG26617	Sorghum	plasma membrane	35.99	35.99
KXG32694	Sorghum	cytosol	35.48	35.6
OQU93471	Sorghum	plasma membrane	36.33	35.37
EES14657	Sorghum	plasma membrane	34.13	35.26
EES11151	Sorghum	plasma membrane	34.13	34.54
KXG28299	Sorghum	plasma membrane	33.79	34.49
OQU83318	Sorghum	mitochondrion, plasma membrane	29.88	34.31
EES12425	Sorghum	plasma membrane	27.84	30.15
EES00465	Sorghum	plastid	31.41	27.74
EES19057	Sorghum	plastid	10.02	23.6

Protein Annotations

MapMan:24.2.2.9	EntrezGene:8075842	UniProt:C5Y8U7	EnsemblPlants:EES12219	ProteinID:EES12219	ProteinID:EES12219.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
PANTHER:PTHR11654	PANTHER:PTHR11654:SF114	EnsemblPlantsGene:SORBI_3006G089300	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0001A871DB
RefSeq:XP_002447891.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:45893609..45897297

Molecular Weight (calculated)

62921.9 Da

IEP (calculated)

8.559

GRAVY (calculated)

0.462

Length

589 amino acids

Sequence
(BLAST)

001: MDVEMSCAAA VSVDWRGRPC RPRRHGGMRA AVFVLGIQAL EIMSIAAVGN NLITYVFGEM HFPLSQAANV VTNFVGTIFL LALLGGFLSD SYLGCFWTML
101: IFGFVELSGF ILLSLQAHLP QLKPPPCNMA SSTDVGGGGC EKASGFKSTV LFLALYLVAL GSGCLKPNMI AHGADQFDGG AARRLPTYFN AAYFSFCAGE
201: LVALTALVWV QTHSGMDVGF GISAVAMAAG LVCLVSGAAF YRNKPPQGSI FTPIARVFVA AFTKRKQVCP SNSNSVNAGA CEPARLAGNF RHSNKFRFLD
301: KACIPVAPQG PNTKPESAWR LCTAAQVQQA KTLLAVTPIF ACTIIFNTVL AQLQTFSVQQ GSAMDTALPP GSGSFRIPPA SLQAIPYAML LALVPAYELL
401: LVPLMKRVTG TRSGITPLQR IGVGLGTVAF SMVAAADVER RRRVAAAEGR QMSVLWIVPQ FLVFGVSEMF TAVGLIEFFY KQACAAGMQA FLTALTYCSY
501: AFGFYLSSVL VSLVNRVTAR HGGGGWLGDN DLNKDRLDLF YWMLAALSVL NFFVYLLCAR WYNAGADGCD APASAGQVAS EVDDGKEII

Best Arabidopsis Sequence Match ( AT1G33440.1 )
(BLAST)

001: MDVHDLSEEA KRGVIHTSEE SLDDLCVDFR GRPCRPSKHG GTRAALFVLG FQAFEMMAIA AVGNNLITYV FNEMHFPLSK SANLVTNFIG TVFLLSLLGG
101: FLSDSYLGSF RTMLVFGVIE ISGFILLSVQ AHLPELRPPE CNMKSTTIHC VEANGYKAAT LYTALCLVAL GSGCLKPNII SHGANQFQRK DLRKLSSFFN
201: AAYFAFSMGQ LIALTLLVWV QTHSGMDVGF GVSAAVMAAG MISLVAGTSF YRNKPPSGSI FTPIAQVFVA AITKRKQICP SNPNMVHQPS TDLVRVKPLL
301: HSNKFRFLDK ACIKTQGKAM ESPWRLCTIE QVHQVKILLS VIPIFACTII FNTILAQLQT FSVQQGSSMN THITKTFQIP PASLQAIPYI ILIFFVPLYE
401: TFFVPLARKL TGNDSGISPL QRIGTGLFLA TFSMVAAALV EKKRRESFLE QNVMLSIFWI APQFLIFGLS EMFTAVGLVE FFYKQSSQSM QSFLTAMTYC
501: SYSFGFYLSS VLVSTVNRVT SSNGSGTKEG WLGDNDLNKD RLDHFYWLLA SLSFINFFNY LFWSRWYSCD PSATHHSAEV NSLEALENGE IKDSTTEKPR
601: I

Arabidopsis Description

NPF4.4Protein NRT1/ PTR FAMILY 4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q56XQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.