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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • golgi 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, peroxisome, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:vacuole
PProwler:secretory
PTS1:peroxisome
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d041163_P001 Maize plasma membrane 88.05 86.98
Os12t0231000-01 Rice plasma membrane 77.68 75.81
EES15876 Sorghum plasma membrane 72.41 73.31
EES15877 Sorghum plasma membrane 68.54 68.18
KXG28299 Sorghum plasma membrane 60.98 60.14
OQU83318 Sorghum mitochondrion, plasma membrane 50.09 55.56
OQU81850 Sorghum plasma membrane 53.43 55.27
OQU81851 Sorghum plasma membrane 52.2 52.75
KXG26617 Sorghum plasma membrane 53.43 51.61
EES14657 Sorghum plasma membrane 49.21 49.12
EES11151 Sorghum plasma membrane 49.38 48.28
EES12425 Sorghum plasma membrane 40.42 42.28
PGSC0003DMT400030530 Potato mitochondrion 23.73 38.46
KRH51937 Soybean plasma membrane 38.49 38.29
Solyc04g079510.1.1 Tomato plasma membrane 37.61 37.48
PGSC0003DMT400030533 Potato plasma membrane 37.26 36.43
PGSC0003DMT400030534 Potato plasma membrane 37.43 36.41
EES12219 Sorghum plasma membrane 37.61 36.33
Solyc04g079520.2.1 Tomato plasma membrane 36.73 35.91
Solyc04g079530.2.1 Tomato plasma membrane 36.38 35.75
KRH61236 Soybean plasma membrane 38.31 35.62
OQU83190 Sorghum plasma membrane 35.15 35.34
KRH02511 Soybean plasma membrane 36.56 35.02
KRG96656 Soybean plasma membrane 35.33 34.9
KRH19434 Soybean plasma membrane 36.03 34.75
EER89980 Sorghum plasma membrane 36.73 34.72
KRH68384 Soybean plasma membrane 35.5 34.71
KXG24751 Sorghum peroxisome, plasma membrane, vacuole 36.03 34.05
VIT_18s0001g11280.t01 Wine grape plastid 37.79 33.8
PGSC0003DMT400054593 Potato plasma membrane 36.38 33.71
OQU87541 Sorghum cytosol, peroxisome, plasma membrane 36.2 33.61
Solyc10g039290.1.1 Tomato plasma membrane 33.57 33.39
EES13374 Sorghum plasma membrane 34.97 33.11
VIT_14s0060g00220.t01 Wine grape plasma membrane 35.68 32.85
Solyc01g102360.1.1 Tomato plasma membrane 35.15 32.84
PGSC0003DMT400011063 Potato cytosol 33.57 32.76
EES05323 Sorghum plasma membrane 34.27 32.66
EER91957 Sorghum plasma membrane 34.09 32.6
KRH33721 Soybean plasma membrane 34.27 32.28
PGSC0003DMT400046950 Potato plasma membrane 34.62 32.24
KRG90426 Soybean plasma membrane 33.74 31.95
OQU93471 Sorghum plasma membrane 33.92 31.9
KXG32694 Sorghum cytosol 32.86 31.86
GSMUA_Achr11P... Banana plasma membrane 35.5 30.56
EES00465 Sorghum plastid 32.34 27.59
EES19057 Sorghum plastid 8.08 18.4
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EntrezGene:8084233UniProt:C5YTX3EnsemblPlants:EES15875ProteinID:EES15875
ProteinID:EES15875.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF21EnsemblPlantsGene:SORBI_3008G081200
SUPFAM:SSF103473unigene:Sbi.2379TMHMM:TMhelixUniParc:UPI0001A8815CRefSeq:XP_002442037.1SEG:seg
Description
hypothetical protein
Coordinates
chr8:+:14313689..14316455
Molecular Weight (calculated)
62218.6 Da
IEP (calculated)
8.781
GRAVY (calculated)
0.528
Length
569 amino acids
Sequence
(BLAST)
001: MALQCLVDWK GRPVNPNRHG GVKATMFIYF LVVMTNIGNI PMLLNVVSYL HGKMHMGIAD ASTTATNFFG AICVFTFFGA FISDSYVKRF YTILIFAPIE
101: ILGYMLLACQ AHFPALHPPP CDIVNHPSEC TAVSGRNLSL LTLGLYVIPI GEGAVRVCAA ALGGDQFDGD DPRELRGKTS FFNWYAFCIS LGGFVGLVFV
201: VWVQNSEGWD LGFVLSALVA LLGMLVLVAG LPFYRHQKPT GSPLTRILQV FVAAFRKRNL SVPEDLVGMH ETTSIEVLER TSGFKFLDKA AVDDGDARRW
301: SQCTVTQVEE AKIILRMLPV FVSSVLGYLP IPLLLTFTVQ QGGTMDTRLG GTHVPPASLF VIPIVFQMLI LVVYDRAVVP WLRRATGYAG GITHLQRIGV
401: GFASNVVALA VAAAVEARRR RHGGAAAAEM SVFWLTPQFF LLGVMDVTSF VGLLEFFYSE ASAGMKSIGG AVFFCILGVA SWLGSVLIRV VNRVTARHGA
501: GTGWLDGASL SAGRLDLFYW LLALFGLVAL LLYLLCAWRY TYRYHPSRMQ SAMEDHRVSP ASKKLDAAL
Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.