Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • cytosol 1
  • vacuole 2
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:extracellular
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d016982_P001 Maize plasma membrane 90.45 90.6
Os02t0580900-01 Rice plasma membrane 85.26 83.58
TraesCS5B01G414000.3 Wheat plasma membrane 80.9 81.31
TraesCS5D01G419200.2 Wheat plasma membrane 80.74 81.01
TraesCS5A01G409600.1 Wheat plasma membrane 79.06 79.46
HORVU5Hr1G099170.6 Barley plasma membrane 79.4 77.7
HORVU2Hr1G065480.1 Barley golgi, plasma membrane 28.81 76.44
GSMUA_Achr3P05990_001 Banana cytosol, plasma membrane, plastid 67.17 69.86
KRH14759 Soybean plasma membrane 64.32 65.42
KRH73378 Soybean cytosol, peroxisome, plasma membrane 64.32 65.31
PGSC0003DMT400001784 Potato cytosol, peroxisome, plasma membrane 63.82 64.25
Solyc12g006050.1.1 Tomato cytosol, peroxisome, plasma membrane 63.48 64.02
Solyc07g049290.2.1 Tomato nucleus 63.32 63.96
Bra031295.1-P Field mustard plasma membrane 62.14 63.53
PGSC0003DMT400010957 Potato cytosol, peroxisome, plasma membrane 62.65 63.18
Bra023868.1-P Field mustard plasma membrane 61.14 63.15
AT3G21670.1 Thale cress plasma membrane 62.14 62.88
CDY44319 Canola plasma membrane 48.74 61.78
CDY38629 Canola plasma membrane 48.74 60.75
VIT_12s0059g01240.t01 Wine grape plastid 64.82 59.63
VIT_02s0087g00580.t01 Wine grape plasma membrane 28.48 57.43
EES13374 Sorghum plasma membrane 51.26 50.92
EER91957 Sorghum plasma membrane 50.42 50.59
KXG32694 Sorghum cytosol 48.58 49.4
OQU93471 Sorghum plasma membrane 49.25 48.59
EES12219 Sorghum plasma membrane 36.52 37.01
OQU83190 Sorghum plasma membrane 34.67 36.57
EER89980 Sorghum plasma membrane 36.52 36.21
EES15876 Sorghum plasma membrane 32.5 34.52
EES15875 Sorghum plasma membrane 32.66 34.27
EES15877 Sorghum plasma membrane 32.83 34.27
OQU81850 Sorghum plasma membrane 31.32 34.0
OQU81851 Sorghum plasma membrane 31.83 33.75
KXG24751 Sorghum peroxisome, plasma membrane, vacuole 33.67 33.39
OQU83318 Sorghum mitochondrion, plasma membrane 28.31 32.94
EES00465 Sorghum plastid 36.68 32.83
OQU87541 Sorghum cytosol, peroxisome, plasma membrane 33.67 32.79
KXG26617 Sorghum plasma membrane 31.99 32.43
EES14657 Sorghum plasma membrane 30.49 31.93
EES11151 Sorghum plasma membrane 30.65 31.44
KXG28299 Sorghum plasma membrane 30.32 31.37
EES19057 Sorghum plastid 12.23 29.2
EES12425 Sorghum plasma membrane 24.96 27.39
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EntrezGene:8070561UniProt:C5XVS5EnsemblPlants:EES05323ProteinID:EES05323
ProteinID:EES05323.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF154EnsemblPlantsGene:SORBI_3004G193000SUPFAM:SSF103473unigene:Sbi.3441
TMHMM:TMhelixUniParc:UPI0001A858E0RefSeq:XP_002452347.1SEG:seg::
Description
hypothetical protein
Coordinates
chr4:+:54488424..54493586
Molecular Weight (calculated)
63629.4 Da
IEP (calculated)
9.417
GRAVY (calculated)
0.367
Length
597 amino acids
Sequence
(BLAST)
001: MVSAGVHGGG GDGQEAVDFR GNPVDKSRTG GWLGAGLILG TELAERVCVM GISMNLVTYL VGELHLSNSK SANVVTNFMG TLNLLALVGG FLADAKLGRY
101: LTIAISATVA ATGVSLLTVD TTVPSMRPPA CANARGPRAH QDCVPATGGQ LALLYAALYT VAAGAGGLKA NVSGFGSDQF DAGDPREERA MVFFFNRFYF
201: CVSLGSLFAV TVLVYVQDNV GRCWGYGVSA VAMLLAVAVL VAGTPRYRYR RPQGSPLTVI GRVLATAWRK RRLTLPADAA ELHGFAAAKV AHTDRLRCLD
301: KAAIVEADLS APAGKQQQQA SAPASTVTEV EEVKMVVKLL PIWSTCILFW TVYSQMTTFS VEQATRMDRH LRPGSSFAVP AGSLSVFLFI SILLFTSLNE
401: RLLVPLAARL TGRPQGLTSL QRVGTGLALS VAAMAVSALV EKKRRDASNG PGHVAISAFW LVPQFFLVGA GEAFAYVGQL EFFIREAPER MKSMSTGLFL
501: VTLSMGFFLS SFLVFAVDAV TGGAWIRNNL DRGRLDLFYW MLAVLGVANF AVFIVFARRH QYKASNLPAA VAPDGAARKK ETDDFVAVAE AVEGMDV
Best Arabidopsis Sequence Match ( AT3G21670.1 )
(BLAST)
001: MVHVSSSHGA KDGSEEAYDY RGNPPDKSKT GGWLGAGLIL GSELSERICV MGISMNLVTY LVGDLHISSA KSATIVTNFM GTLNLLGLLG GFLADAKLGR
101: YKMVAISASV TALGVLLLTV ATTISSMRPP ICDDFRRLHH QCIEANGHQL ALLYVALYTI ALGGGGIKSN VSGFGSDQFD TSDPKEEKQM IFFFNRFYFS
201: ISVGSLFAVI ALVYVQDNVG RGWGYGISAA TMVVAAIVLL CGTKRYRFKK PKGSPFTTIW RVGFLAWKKR KESYPAHPSL LNGYDNTTVP HTEMLKCLDK
301: AAISKNESSP SSKDFEEKDP WIVSTVTQVE EVKLVMKLVP IWATNILFWT IYSQMTTFTV EQATFMDRKL GSFTVPAGSY SAFLILTILL FTSLNERVFV
401: PLTRRLTKKP QGITSLQRIG VGLVFSMAAM AVAAVIENAR REAAVNNDKK ISAFWLVPQY FLVGAGEAFA YVGQLEFFIR EAPERMKSMS TGLFLSTISM
501: GFFVSSLLVS LVDRVTDKSW LRSNLNKARL NYFYWLLVVL GALNFLIFIV FAMKHQYKAD VITVVVTDDD SVEKEVTKKE SSEFELKDIP
Arabidopsis Description
NPF6.4Protein NRT1/ PTR FAMILY 6.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVE0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.