Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031295.1-P | Field mustard | plasma membrane | 90.68 | 91.61 |
| CDY44319 | Canola | plasma membrane | 72.88 | 91.3 |
| Bra023868.1-P | Field mustard | plasma membrane | 88.31 | 90.14 |
| CDY38629 | Canola | plasma membrane | 72.71 | 89.56 |
| KRH14759 | Soybean | plasma membrane | 69.49 | 69.85 |
| KRH73378 | Soybean | cytosol, peroxisome, plasma membrane | 69.15 | 69.39 |
| PGSC0003DMT400001784 | Potato | cytosol, peroxisome, plasma membrane | 66.1 | 65.77 |
| Solyc12g006050.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 65.76 | 65.54 |
| Solyc07g049290.2.1 | Tomato | nucleus | 65.59 | 65.48 |
| PGSC0003DMT400010957 | Potato | cytosol, peroxisome, plasma membrane | 64.75 | 64.53 |
| VIT_12s0059g01240.t01 | Wine grape | plastid | 70.68 | 64.25 |
| GSMUA_Achr3P05990_001 | Banana | cytosol, plasma membrane, plastid | 61.86 | 63.59 |
| EES05323 | Sorghum | plasma membrane | 62.88 | 62.14 |
| Zm00001d016982_P001 | Maize | plasma membrane | 62.71 | 62.08 |
| TraesCS5A01G409600.1 | Wheat | plasma membrane | 62.37 | 61.95 |
| TraesCS5D01G419200.2 | Wheat | plasma membrane | 62.37 | 61.85 |
| TraesCS5B01G414000.3 | Wheat | plasma membrane | 62.2 | 61.78 |
| HORVU2Hr1G065480.1 | Barley | golgi, plasma membrane | 23.39 | 61.33 |
| Os02t0580900-01 | Rice | plasma membrane | 62.03 | 60.1 |
| HORVU5Hr1G099170.6 | Barley | plasma membrane | 62.03 | 60.0 |
| VIT_02s0087g00580.t01 | Wine grape | plasma membrane | 29.83 | 59.46 |
| TraesCS2D01G327000.1 | Wheat | plasma membrane | 56.78 | 59.29 |
| TraesCS2B01G346100.1 | Wheat | plasma membrane | 56.1 | 58.58 |
| TraesCS2A01G335800.1 | Wheat | mitochondrion | 56.61 | 55.21 |
| AT2G26690.1 | Thale cress | plasma membrane | 48.31 | 49.39 |
| HORVU2Hr1G081050.1 | Barley | endoplasmic reticulum, extracellular | 5.59 | 47.83 |
| AT1G12110.1 | Thale cress | plasma membrane | 46.61 | 46.61 |
| AT1G69850.1 | Thale cress | plasma membrane | 35.76 | 36.07 |
| Os04t0464400-00 | Rice | peroxisome, plasma membrane | 37.97 | 35.96 |
| AT1G27040.1 | Thale cress | plasma membrane | 34.24 | 35.63 |
| AT1G59740.1 | Thale cress | plasma membrane | 35.08 | 35.03 |
| AT3G25260.1 | Thale cress | plasma membrane | 30.34 | 34.76 |
| AT1G33440.1 | Thale cress | plasma membrane | 35.08 | 34.44 |
| AT3G25280.1 | Thale cress | plasma membrane | 28.98 | 32.82 |
| AT5G62730.1 | Thale cress | plasma membrane | 32.54 | 32.6 |
| AT5G13400.1 | Thale cress | plasma membrane | 33.05 | 31.25 |
Protein Annotations
| MapMan:24.2.2.9 | EntrezGene:821721 | ProteinID:AEE76536.1 | EMBL:AF372959 | EMBL:AJ131464 | ArrayExpress:AT3G21670 |
| EnsemblPlantsGene:AT3G21670 | RefSeq:AT3G21670 | TAIR:AT3G21670 | RefSeq:AT3G21670-TAIR-G | EnsemblPlants:AT3G21670.1 | TAIR:AT3G21670.1 |
| EMBL:AY084539 | EMBL:AY143946 | Unigene:At.23165 | ProteinID:BAB02362.1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015293 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0042128 | GO:GO:0055085 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_trans_sf | RefSeq:NP_188804.1 | PFAM:PF00854 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF154 |
| UniProt:Q9LVE0 | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI00000AC42D | SEG:seg | : |
Description
NPF6.4Protein NRT1/ PTR FAMILY 6.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVE0]
Coordinates
chr3:-:7626757..7629205
Molecular Weight (calculated)
65249.5 Da
IEP (calculated)
9.410
GRAVY (calculated)
0.205
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHVSSSHGA KDGSEEAYDY RGNPPDKSKT GGWLGAGLIL GSELSERICV MGISMNLVTY LVGDLHISSA KSATIVTNFM GTLNLLGLLG GFLADAKLGR
101: YKMVAISASV TALGVLLLTV ATTISSMRPP ICDDFRRLHH QCIEANGHQL ALLYVALYTI ALGGGGIKSN VSGFGSDQFD TSDPKEEKQM IFFFNRFYFS
201: ISVGSLFAVI ALVYVQDNVG RGWGYGISAA TMVVAAIVLL CGTKRYRFKK PKGSPFTTIW RVGFLAWKKR KESYPAHPSL LNGYDNTTVP HTEMLKCLDK
301: AAISKNESSP SSKDFEEKDP WIVSTVTQVE EVKLVMKLVP IWATNILFWT IYSQMTTFTV EQATFMDRKL GSFTVPAGSY SAFLILTILL FTSLNERVFV
401: PLTRRLTKKP QGITSLQRIG VGLVFSMAAM AVAAVIENAR REAAVNNDKK ISAFWLVPQY FLVGAGEAFA YVGQLEFFIR EAPERMKSMS TGLFLSTISM
501: GFFVSSLLVS LVDRVTDKSW LRSNLNKARL NYFYWLLVVL GALNFLIFIV FAMKHQYKAD VITVVVTDDD SVEKEVTKKE SSEFELKDIP
101: YKMVAISASV TALGVLLLTV ATTISSMRPP ICDDFRRLHH QCIEANGHQL ALLYVALYTI ALGGGGIKSN VSGFGSDQFD TSDPKEEKQM IFFFNRFYFS
201: ISVGSLFAVI ALVYVQDNVG RGWGYGISAA TMVVAAIVLL CGTKRYRFKK PKGSPFTTIW RVGFLAWKKR KESYPAHPSL LNGYDNTTVP HTEMLKCLDK
301: AAISKNESSP SSKDFEEKDP WIVSTVTQVE EVKLVMKLVP IWATNILFWT IYSQMTTFTV EQATFMDRKL GSFTVPAGSY SAFLILTILL FTSLNERVFV
401: PLTRRLTKKP QGITSLQRIG VGLVFSMAAM AVAAVIENAR REAAVNNDKK ISAFWLVPQY FLVGAGEAFA YVGQLEFFIR EAPERMKSMS TGLFLSTISM
501: GFFVSSLLVS LVDRVTDKSW LRSNLNKARL NYFYWLLVVL GALNFLIFIV FAMKHQYKAD VITVVVTDDD SVEKEVTKKE SSEFELKDIP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.