Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G327000.1 | Wheat | plasma membrane | 43.82 | 48.32 |
| TraesCS2B01G346100.1 | Wheat | plasma membrane | 43.66 | 48.14 |
| Os02t0580900-01 | Rice | plasma membrane | 45.91 | 46.96 |
| TraesCS2A01G335800.1 | Wheat | mitochondrion | 43.98 | 45.29 |
| CDY44319 | Canola | plasma membrane | 33.07 | 43.74 |
| CDY38629 | Canola | plasma membrane | 33.07 | 43.01 |
| GSMUA_Achr3P05990_001 | Banana | cytosol, plasma membrane, plastid | 39.49 | 42.86 |
| PGSC0003DMT400001784 | Potato | cytosol, peroxisome, plasma membrane | 38.52 | 40.47 |
| Solyc07g049290.2.1 | Tomato | nucleus | 38.36 | 40.44 |
| Solyc12g006050.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 38.2 | 40.2 |
| PGSC0003DMT400010957 | Potato | cytosol, peroxisome, plasma membrane | 37.72 | 39.7 |
| KRH73378 | Soybean | cytosol, peroxisome, plasma membrane | 37.4 | 39.63 |
| KRH14759 | Soybean | plasma membrane | 37.24 | 39.52 |
| Bra023868.1-P | Field mustard | plasma membrane | 36.44 | 39.27 |
| Bra031295.1-P | Field mustard | plasma membrane | 35.79 | 38.18 |
| AT3G21670.1 | Thale cress | plasma membrane | 35.96 | 37.97 |
| VIT_12s0059g01240.t01 | Wine grape | plastid | 37.4 | 35.9 |
| Os10t0554200-02 | Rice | plasma membrane | 31.62 | 33.05 |
| Os03t0103000-01 | Rice | cytosol, peroxisome, plasma membrane | 30.82 | 32.6 |
| Os08t0155400-01 | Rice | plasma membrane | 27.45 | 32.57 |
| Os01t0103100-01 | Rice | plasma membrane | 25.68 | 26.4 |
| Os06t0581000-01 | Rice | plasma membrane | 22.95 | 24.24 |
| Os11t0235200-01 | Rice | plasma membrane | 23.43 | 23.32 |
| Os12t0231000-01 | Rice | plasma membrane | 21.67 | 23.16 |
| Os04t0441800-01 | Rice | plasma membrane | 22.47 | 22.91 |
| Os04t0491500-02 | Rice | plasma membrane | 20.22 | 22.62 |
| Os11t0283500-01 | Rice | plasma membrane | 19.58 | 20.93 |
| Os11t0282800-00 | Rice | plasma membrane | 19.26 | 19.9 |
| Os04t0491200-00 | Rice | plasma membrane, vacuole | 18.3 | 17.4 |
| VIT_02s0087g00580.t01 | Wine grape | plasma membrane | 6.42 | 13.51 |
| Os11t0284300-00 | Rice | mitochondrion | 5.3 | 10.48 |
| HORVU2Hr1G081050.1 | Barley | endoplasmic reticulum, extracellular | 0.64 | 5.8 |
| Os04t0491350-00 | Rice | plasma membrane | 0.32 | 0.43 |
| Os01t0749000-02 | Rice | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | UniProt:A0A0N7KJ69 | ProteinID:BAS89585.1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006857 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0055085 | InterPro:MFS_trans_sf | EnsemblPlantsGene:Os04g0464400 | EnsemblPlants:Os04t0464400-00 | PFAM:PF00854 |
| InterPro:POT_fam | ScanProsite:PS01022 | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF154 | InterPro:PTR2_symporter_CS | SUPFAM:SSF103473 |
| TMHMM:TMhelix | UniParc:UPI00039395B3 | SEG:seg | : | : | : |
Description
nitrate transporter 1.3BSimilar to peptide transporter PTR2. (Os04t0464400-00)
Coordinates
chr4:-:23178600..23182740
Molecular Weight (calculated)
65786.3 Da
IEP (calculated)
11.974
GRAVY (calculated)
-0.256
Length
623 amino acids
Sequence
(BLAST)
(BLAST)
001: VSAGVHGGDD GVVVDFRGNP VDKDRTGGWL GAGLILGTEL AERVCVVGIS MNLVTYLVGD LHLSNARSAN IVTNFLGTLN LLALLGGFLA DAVLGRYLTV
101: AVSATIAAIG VSLLAASTVV PGMRPPPCGD AVAAAAAAES GGCVAASGGQ MAMLYAALYT AAAGAGGLKA NVSGFGSDQF DGRDRREGKA MLFFFNRFYF
201: CISLGSVLAV TALVYVQEDV GRGWGYGASA AAMVAAVAVF AAGTPRYRYR RPQGSPLTAI GRVLWAAWRK RRMPFPADAG ELHGFHKAKV PHTNRLRSTH
301: LTVHIDIIFN HIFSFLQSRP GGGDATGAAS GGADGDGGGG GEDGGEAAPH LVHEHPLLDG LLPDDHLLRR AGVAHGPPRR RLRRAGGLLL RLPLPVHPPL
401: HLRQRAAPRP ARAPPDDHTP PAGADLPAAR RRGARPRHAR HGRLGARREE APRRVRRSRR RRRRDDQRVL AGAAVLPGGR RRGVRVRGAA GVLHQGGPRA
501: DEVHEHGPVP RHARHGVLPE QPPRVRRRRR HAGRVDPGRP GRREAGPVLL DARRARGGQL RGVPGVREPA PVQAGDTARG GLAAGRRGRG QGGRDDSERD
601: GLLARTRSML LLCTWMAGEL MPG
101: AVSATIAAIG VSLLAASTVV PGMRPPPCGD AVAAAAAAES GGCVAASGGQ MAMLYAALYT AAAGAGGLKA NVSGFGSDQF DGRDRREGKA MLFFFNRFYF
201: CISLGSVLAV TALVYVQEDV GRGWGYGASA AAMVAAVAVF AAGTPRYRYR RPQGSPLTAI GRVLWAAWRK RRMPFPADAG ELHGFHKAKV PHTNRLRSTH
301: LTVHIDIIFN HIFSFLQSRP GGGDATGAAS GGADGDGGGG GEDGGEAAPH LVHEHPLLDG LLPDDHLLRR AGVAHGPPRR RLRRAGGLLL RLPLPVHPPL
401: HLRQRAAPRP ARAPPDDHTP PAGADLPAAR RRGARPRHAR HGRLGARREE APRRVRRSRR RRRRDDQRVL AGAAVLPGGR RRGVRVRGAA GVLHQGGPRA
501: DEVHEHGPVP RHARHGVLPE QPPRVRRRRR HAGRVDPGRP GRREAGPVLL DARRARGGQL RGVPGVREPA PVQAGDTARG GLAAGRRGRG QGGRDDSERD
601: GLLARTRSML LLCTWMAGEL MPG
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.