Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os07t0150700-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12110.1 | Os07t0150700-01 | AT1G30270.1 | 19766570 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G297000.1 | Wheat | plasma membrane | 87.05 | 75.79 |
| TraesCS7A01G301700.1 | Wheat | plasma membrane | 86.86 | 75.62 |
| EES13374 | Sorghum | plasma membrane | 86.48 | 75.54 |
| TraesCS7B01G201900.1 | Wheat | plasma membrane | 86.67 | 75.46 |
| Zm00001d024587_P001 | Maize | plasma membrane | 86.48 | 74.67 |
| HORVU7Hr1G071600.2 | Barley | mitochondrion | 86.86 | 73.43 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 71.05 | 63.87 |
| GSMUA_Achr1P20240_001 | Banana | plasma membrane | 70.29 | 62.23 |
| Os10t0554200-02 | Rice | plasma membrane | 68.38 | 60.23 |
| PGSC0003DMT400012226 | Potato | cytosol, peroxisome, plasma membrane | 67.43 | 60.0 |
| Solyc08g078950.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 67.05 | 59.66 |
| KRH28055 | Soybean | plasma membrane | 65.52 | 58.7 |
| KRH04097 | Soybean | peroxisome | 66.29 | 58.59 |
| GSMUA_Achr6P36750_001 | Banana | plasma membrane | 73.33 | 58.25 |
| VIT_02s0154g00260.t01 | Wine grape | plastid | 71.43 | 58.23 |
| PGSC0003DMT400032493 | Potato | cytosol, peroxisome, plasma membrane | 65.33 | 58.14 |
| KRH77380 | Soybean | cytosol, plasma membrane, plastid | 64.38 | 57.68 |
| Solyc08g007430.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 64.76 | 57.63 |
| Os03t0103000-01 | Rice | cytosol, peroxisome, plasma membrane | 64.19 | 57.22 |
| KRH57369 | Soybean | plasma membrane | 64.19 | 57.12 |
| Bra016789.1-P | Field mustard | plasma membrane | 61.9 | 55.08 |
| CDY21035 | Canola | plasma membrane | 59.81 | 54.61 |
| AT1G12110.1 | Thale cress | plasma membrane | 61.14 | 54.41 |
| Solyc06g060620.2.1 | Tomato | plasma membrane | 61.33 | 54.39 |
| CDY15967 | Canola | plasma membrane | 59.24 | 54.18 |
| Bra026991.1-P | Field mustard | plasma membrane | 60.76 | 54.16 |
| CDY31242 | Canola | plasma membrane | 59.24 | 54.09 |
| PGSC0003DMT400035882 | Potato | plasma membrane | 60.57 | 53.72 |
| CDY26539 | Canola | plasma membrane | 58.67 | 53.66 |
| CDY30051 | Canola | cytosol, peroxisome, plasma membrane | 35.24 | 53.01 |
| CDY69100 | Canola | plasma membrane | 32.38 | 51.2 |
| Bra019744.1-P | Field mustard | plasma membrane | 25.71 | 50.37 |
| Os02t0580900-01 | Rice | plasma membrane | 50.86 | 43.84 |
| Os06t0581000-01 | Rice | plasma membrane | 39.05 | 34.75 |
| Os04t0441800-01 | Rice | plasma membrane | 38.86 | 33.39 |
| Os11t0235200-01 | Rice | plasma membrane | 39.05 | 32.75 |
| Os01t0103100-01 | Rice | plasma membrane | 35.43 | 30.69 |
| Os11t0284300-00 | Rice | mitochondrion | 17.9 | 29.84 |
| Os04t0491500-02 | Rice | plasma membrane | 31.62 | 29.8 |
| Os11t0282800-00 | Rice | plasma membrane | 33.9 | 29.52 |
| Os12t0231000-01 | Rice | plasma membrane | 32.76 | 29.5 |
| Os11t0283500-01 | Rice | plasma membrane | 31.81 | 28.64 |
| Os04t0464400-00 | Rice | peroxisome, plasma membrane | 32.57 | 27.45 |
| Os04t0491200-00 | Rice | plasma membrane, vacuole | 21.33 | 17.1 |
| Os01t0749000-02 | Rice | cytosol, plastid | 0.38 | 0.79 |
| Os04t0491350-00 | Rice | plasma membrane | 0.57 | 0.65 |
Protein Annotations
| MapMan:24.2.2.9 | ProteinID:BAF22934.1 | ProteinID:BAT03883.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006857 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | InterPro:MFS_trans_sf | EnsemblPlantsGene:Os08g0155400 | EnsemblPlants:Os08t0155400-01 | PFAM:PF00854 | InterPro:POT_fam |
| ScanProsite:PS01022 | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF78 | InterPro:PTR2_symporter_CS | UniProt:Q0J7Y1 | SUPFAM:SSF103473 |
| TMHMM:TMhelix | UniParc:UPI0000DD93C6 | SEG:seg | : | : | : |
Description
nitrate transporter 1.1ASimilar to Nitrate/chlorate transporter. (Os08t0155400-01);Similar to cDNA clone:J023045B01, full insert sequence. (Os08t0155400-02);Similar to cDNA clone:J023045B01, full insert sequence. (Os08t0155400-03)
Coordinates
chr8:-:3182341..3190117
Molecular Weight (calculated)
56615.3 Da
IEP (calculated)
9.506
GRAVY (calculated)
0.423
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: VVTNFMGTSF MLCLLGGFVA DSFLGRYLTI AIFTAVQASG VTILTISTAA PGLRPAACAA GSAACERATG AQMGVLYLAL YLTALGTGGL KSSVSGFGSD
101: QFDESDSGEK SQMMRFFNWF FFFISLGSLL AVTVLVYVQD NLGRPWGYGA CAAAIAAGLV VFLAGTRRYR FKKLVGSPLT QIAAVVVAAW RKRRLELPSD
201: PAMLYDIDVG KLAAAEVELA ASSKKSKLKQ RLPHTKQFRF LDHAAINDAP DGEQSKWTLA TLTDVEEVKT VARMLPIWAT TIMFWTVYAQ MTTFSVSQAT
301: TMDRHIGASF QIPAGSLTVF FVGSILLTVP IYDRLVVPVA RRATGNPHGL TPLQRIGVGL VLSIVAMVCA ALTEVRRLRV ARDARVGGGE AVPMTVFWLI
401: PQFLFVGAGE AFTYIGQLDF FLRECPKGMK TMSTGLFLST LSLGFFVSSA LVAAVHKLTG DRHPWLADDL NKGQLHKFYW LLAGVCLANL LVYLVAARWY
501: KYKAGRAAAA GDGGVEMADA EPCLH
101: QFDESDSGEK SQMMRFFNWF FFFISLGSLL AVTVLVYVQD NLGRPWGYGA CAAAIAAGLV VFLAGTRRYR FKKLVGSPLT QIAAVVVAAW RKRRLELPSD
201: PAMLYDIDVG KLAAAEVELA ASSKKSKLKQ RLPHTKQFRF LDHAAINDAP DGEQSKWTLA TLTDVEEVKT VARMLPIWAT TIMFWTVYAQ MTTFSVSQAT
301: TMDRHIGASF QIPAGSLTVF FVGSILLTVP IYDRLVVPVA RRATGNPHGL TPLQRIGVGL VLSIVAMVCA ALTEVRRLRV ARDARVGGGE AVPMTVFWLI
401: PQFLFVGAGE AFTYIGQLDF FLRECPKGMK TMSTGLFLST LSLGFFVSSA LVAAVHKLTG DRHPWLADDL NKGQLHKFYW LLAGVCLANL LVYLVAARWY
501: KYKAGRAAAA GDGGVEMADA EPCLH
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.