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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • plastid 1
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400080484

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12110.1 PGSC0003DMT400080484 AT1G30270.1 19766570
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 98.64 98.64
PGSC0003DMT400012226 Potato cytosol, peroxisome, plasma membrane 84.58 84.58
PGSC0003DMT400035882 Potato plasma membrane 75.93 75.68
CDY30051 Canola cytosol, peroxisome, plasma membrane 41.36 69.91
VIT_02s0154g00260.t01 Wine grape plastid 75.93 69.57
GSMUA_Achr8P11180_001 Banana peroxisome 66.27 68.72
KRH04097 Soybean peroxisome 68.64 68.18
GSMUA_Achr11P... Banana plasma membrane 65.42 68.08
GSMUA_Achr8P11190_001 Banana peroxisome 65.08 67.96
Bra016789.1-P Field mustard plasma membrane 67.8 67.8
CDY31242 Canola plasma membrane 65.93 67.65
CDY21035 Canola plasma membrane 65.93 67.65
CDY15967 Canola plasma membrane 65.59 67.42
Bra026991.1-P Field mustard plasma membrane 67.12 67.23
CDY26539 Canola plasma membrane 65.25 67.07
AT1G12110.1 Thale cress plasma membrane 66.95 66.95
CDY69100 Canola plasma membrane 37.63 66.87
Bra019744.1-P Field mustard plasma membrane 30.17 66.42
EES13374 Sorghum plasma membrane 66.61 65.39
Os08t0155400-01 Rice plasma membrane 58.14 65.33
GSMUA_Achr1P20240_001 Banana plasma membrane 65.25 64.92
KRH57369 Soybean plasma membrane 64.75 64.75
TraesCS7B01G201900.1 Wheat plasma membrane 65.93 64.51
TraesCS7D01G297000.1 Wheat plasma membrane 65.76 64.34
GSMUA_Achr11P... Banana peroxisome 61.36 64.3
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 63.56 64.21
TraesCS7A01G301700.1 Wheat plasma membrane 65.42 64.01
Zm00001d024587_P001 Maize plasma membrane 65.76 63.82
HORVU7Hr1G071600.2 Barley mitochondrion 65.93 62.64
EER91957 Sorghum plasma membrane 63.05 62.52
TraesCS4D01G361500.1 Wheat peroxisome 63.73 62.05
TraesCS1B01G225000.1 Wheat plasma membrane 62.54 62.02
Os03t0103000-01 Rice cytosol, peroxisome, plasma membrane 61.86 61.97
TraesCS4B01G375800.1 Wheat plasma membrane 63.56 61.78
Os10t0554200-02 Rice plasma membrane 62.37 61.74
Zm00001d029933_P001 Maize cytosol, peroxisome, plasma membrane 61.53 61.73
TraesCS1A01G211000.1 Wheat cytosol 62.2 61.68
TraesCS1B01G224900.1 Wheat plasma membrane 62.2 61.58
Zm00001d029932_P001 Maize plasma membrane 62.03 61.51
TraesCS1D01G214300.1 Wheat plasma membrane 62.03 61.51
TraesCS5A01G537100.1 Wheat peroxisome 63.39 61.41
TraesCS1D01G214200.1 Wheat plasma membrane 62.03 61.41
OQU93471 Sorghum plasma membrane 62.88 61.32
TraesCS4B01G371000.1 Wheat peroxisome 62.37 61.03
Zm00001d027285_P001 Maize cytosol, plasma membrane, vacuole 61.69 60.67
TraesCS1A01G210900.1 Wheat plasma membrane 49.49 60.46
HORVU1Hr1G053990.4 Barley peroxisome 62.54 59.81
HORVU4Hr1G088020.4 Barley nucleus, plasma membrane 62.88 59.74
GSMUA_Achr6P36750_001 Banana plasma membrane 64.92 57.94
PGSC0003DMT400070732 Potato plasma membrane 53.39 54.78
PGSC0003DMT400075163 Potato plasma membrane 53.22 54.14
PGSC0003DMT400053569 Potato endoplasmic reticulum, plasma membrane 23.56 52.26
PGSC0003DMT400010957 Potato cytosol, peroxisome, plasma membrane 50.0 49.83
HORVU1Hr1G054020.3 Barley mitochondrion, peroxisome, plastid 44.75 48.35
PGSC0003DMT400001784 Potato cytosol, peroxisome, plasma membrane 48.47 48.23
PGSC0003DMT400045415 Potato plasma membrane 37.29 38.26
PGSC0003DMT400007441 Potato plasma membrane 37.29 37.67
PGSC0003DMT400053373 Potato cytosol, peroxisome, plasma membrane 36.44 35.54
PGSC0003DMT400082762 Potato plasma membrane 26.78 34.96
PGSC0003DMT400030534 Potato plasma membrane 34.41 34.7
PGSC0003DMT400030533 Potato plasma membrane 33.9 34.36
PGSC0003DMT400030530 Potato mitochondrion 20.34 34.19
PGSC0003DMT400045412 Potato mitochondrion 36.27 34.13
PGSC0003DMT400065182 Potato plasma membrane 33.9 33.96
PGSC0003DMT400011063 Potato cytosol 32.88 33.28
PGSC0003DMT400046950 Potato plasma membrane 33.56 32.41
PGSC0003DMT400072037 Potato cytosol, peroxisome, plasma membrane 34.92 31.55
PGSC0003DMT400071504 Potato plasma membrane 31.36 30.99
PGSC0003DMT400054593 Potato plasma membrane 31.69 30.46
Protein Annotations
EntrezGene:102603215MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006857GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
UniProt:M1AXI0InterPro:MFS_trans_sfPFAM:PF00854EnsemblPlantsGene:PGSC0003DMG400012479PGSC:PGSC0003DMG400012479EnsemblPlants:PGSC0003DMT400032493
InterPro:POT_famScanProsite:PS01022ScanProsite:PS01023PANTHER:PTHR11654PANTHER:PTHR11654:SF78InterPro:PTR2_symporter_CS
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000294B9AERefSeq:XP_006358355.1SEG:seg:
Description
Nitrate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400012479]
Coordinates
chr8:-:479008..483551
Molecular Weight (calculated)
65325.1 Da
IEP (calculated)
8.898
GRAVY (calculated)
0.304
Length
590 amino acids
Sequence
(BLAST)
001: MSLPETQNDA KALPDAWDYK GRPSLRSSSG GWASGAMILG VEAVERLTTL GIAVNLVTYL TGTMHLGNAT AANNVTNFLG TSFMLTLLGG FIADTFLGRY
101: LTIGIFATVQ AIGVTILTIS TIIPSLRPPK CEQGSSSCIP ASGKQLMVLY IALYMTALGT GGLKSSVSGF GTDQFDDSNE KEKGQMIKFF DWFFFFINVG
201: SLGAVTILVY VQDNLGREWG YGICACAIVI ALVLFLFGTR KYRFKKLVGS PLTQIASVFV AAWRNRHMEL PSDSSLLYEI DDNVFGEGHK KRKQKLPHSK
301: EYRFLDKAAI KEDGLESNVV NKWKLSTLTD VEEVKLLFRM LPTWATTIMF WTTYAQMTTF SVSQATTMDR HIGKSFEIPP ASLTAFFVGA ILLTVIFYDR
401: VIVPICRRVA NKRHGLTPLQ RIFIGLILSI IAMVASALTE VKRLNTAHLN GLTNDPNATI PLSVFWLIPQ FLLIGAGEAF TYIGQLDFFL RECPKGMKTM
501: STGLFLSTLA LGFFFSSILV TIVHMVTGTT HPWIADNLNQ GKLHDFYWLL AILSVLNLMV FLYTSKTYVY KEKRLAEMGI ELEDSGPVCH
Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.