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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • plastid 1
  • peroxisome 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr4P23000_001
GSMUA_Achr4P31540_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12110.1 GSMUA_Achr4P23000_001 AT1G30270.1 19766570
AT1G12110.1 GSMUA_Achr4P31540_001 AT1G30270.1 19766570
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P11180_001 Banana peroxisome 78.86 78.03
GSMUA_Achr8P11190_001 Banana peroxisome 76.55 76.28
GSMUA_Achr11P... Banana plasma membrane 75.84 75.31
GSMUA_Achr1P20240_001 Banana plasma membrane 70.34 66.78
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 67.67 65.24
PGSC0003DMT400012226 Potato cytosol, peroxisome, plasma membrane 66.07 63.05
Solyc08g078950.2.1 Tomato cytosol, peroxisome, plasma membrane 65.36 62.37
CDY30051 Canola cytosol, peroxisome, plasma membrane 38.54 62.18
PGSC0003DMT400032493 Potato cytosol, peroxisome, plasma membrane 64.3 61.36
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 64.3 61.36
GSMUA_Achr6P36750_001 Banana plasma membrane 71.4 60.82
TraesCS1D01G214200.1 Wheat plasma membrane 64.3 60.74
EER91957 Sorghum plasma membrane 64.12 60.67
TraesCS1B01G224900.1 Wheat plasma membrane 64.12 60.57
Zm00001d027285_P001 Maize cytosol, plasma membrane, vacuole 64.48 60.5
TraesCS4D01G361500.1 Wheat peroxisome 65.01 60.4
OQU93471 Sorghum plasma membrane 64.83 60.33
TraesCS5A01G537100.1 Wheat peroxisome 65.01 60.1
Bra019744.1-P Field mustard plasma membrane 28.6 60.07
Os10t0554200-02 Rice plasma membrane 63.59 60.07
TraesCS1B01G225000.1 Wheat plasma membrane 63.41 60.0
TraesCS1A01G211000.1 Wheat cytosol 63.41 60.0
TraesCS1D01G214300.1 Wheat plasma membrane 63.41 60.0
Os03t0103000-01 Rice cytosol, peroxisome, plasma membrane 62.7 59.93
TraesCS4B01G375800.1 Wheat plasma membrane 64.48 59.8
KRH04097 Soybean peroxisome 63.06 59.76
Zm00001d029932_P001 Maize plasma membrane 63.06 59.66
CDY69100 Canola plasma membrane 35.17 59.64
TraesCS4B01G371000.1 Wheat peroxisome 63.77 59.54
KRH28055 Soybean plasma membrane 61.46 59.04
TraesCS1A01G210900.1 Wheat plasma membrane 50.62 59.01
KRH77380 Soybean cytosol, plasma membrane, plastid 61.28 58.87
Zm00001d029933_P001 Maize cytosol, peroxisome, plasma membrane 61.46 58.84
HORVU1Hr1G053990.4 Barley peroxisome 64.3 58.67
Solyc06g060620.2.1 Tomato plasma membrane 61.46 58.45
PGSC0003DMT400035882 Potato plasma membrane 61.1 58.11
VIT_02s0154g00260.t01 Wine grape plastid 66.25 57.92
CDY15967 Canola plasma membrane 58.97 57.84
CDY26539 Canola plasma membrane 58.79 57.67
HORVU4Hr1G088020.4 Barley nucleus, plasma membrane 63.59 57.65
CDY21035 Canola plasma membrane 58.79 57.57
CDY31242 Canola plasma membrane 58.79 57.57
Bra016789.1-P Field mustard plasma membrane 59.5 56.78
Bra026991.1-P Field mustard plasma membrane 59.33 56.71
AT1G12110.1 Thale cress plasma membrane 59.33 56.61
KRH57369 Soybean plasma membrane 58.97 56.27
GSMUA_Achr6P05170_001 Banana plasma membrane 53.46 51.99
HORVU1Hr1G054020.3 Barley mitochondrion, peroxisome, plastid 44.94 46.34
GSMUA_Achr7P08300_001 Banana plasma membrane 54.88 45.91
GSMUA_Achr9P14440_001 Banana plasma membrane 16.52 45.81
GSMUA_Achr3P05990_001 Banana cytosol, plasma membrane, plastid 46.18 45.3
GSMUA_Achr4P30700_001 Banana plasma membrane 54.53 44.69
GSMUA_Achr7P08880_001 Banana plasma membrane 31.79 32.37
GSMUA_Achr10P... Banana plasma membrane 31.97 31.91
GSMUA_Achr8P08410_001 Banana plasma membrane 33.04 31.58
GSMUA_Achr2P16840_001 Banana plasma membrane, plastid 33.21 31.01
GSMUA_Achr6P07370_001 Banana plasma membrane 30.73 30.89
GSMUA_Achr9P08330_001 Banana plasma membrane 31.79 30.65
GSMUA_Achr9P01100_001 Banana cytosol, peroxisome, plasma membrane 32.33 30.59
GSMUA_Achr5P16920_001 Banana plasma membrane 30.2 30.52
GSMUA_Achr6P00820_001 Banana plasma membrane 33.21 29.59
GSMUA_Achr6P29080_001 Banana plasma membrane 30.55 29.15
GSMUA_AchrUn_... Banana plasma membrane 9.06 27.57
GSMUA_Achr8P29280_001 Banana plasma membrane 28.95 25.59
GSMUA_Achr11P... Banana plasma membrane 27.35 23.3
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006857GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:GSMUA_Achr11G04320_001EnsemblPlants:GSMUA_Achr11P04320_001EnsemblPlants:GSMUA_Achr11T04320_001InterPro:IPR020846UniProt:M0RPB2InterPro:MFS_dom
InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famScanProsite:PS01022ScanProsite:PS01023PANTHER:PTHR11654
PANTHER:PTHR11654:SF142InterPro:PTR2_symporter_CSSUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000295188DSEG:seg
Description
Nitrate transporter 1.1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G04320_001]
Coordinates
chr11:-:3184270..3186518
Molecular Weight (calculated)
61214.0 Da
IEP (calculated)
9.490
GRAVY (calculated)
0.372
Length
563 amino acids
Sequence
(BLAST)
001: MEIVVLPETA GEERPLSDAW DSKGRPAIKS RTGGWVCAAT SLVVEMGERL ATLSIAVNLG PYLRGTMHLG GADSANIITN FLGTSFILCL FGGFIADTFL
101: GRYLTIAVFT AVQACGVIIL TISTVAPGLR PPACAGPSSG GCVPANGLQM GMLYLGLFTT ALGTGGLKSS VSGFGSDQFD ESDRIEKKQM MKFFRYFFFF
201: INVGSILAVT VMVYIQDHFG RRWGYGICAV AIIAGLALFL SKTNRYRFKK LVGSPLTQFA AVVACAWRKR RLALPEDPSI LYDIDTGVAR KGKSKKEKVP
301: HSQQFRFLDR AAIIEGDAPT EQSKWRLSTL TDVEEVKQVI RMLPTWATTI MFWTVYAQMT TFSVSQATTM DRHIGPSFEI PAGSLTVFFV GSILVTRIAV
401: GLVFSILGMC AASLTERKRL STALANPTAA VVPLVVFWLI PQFFLVGAGV AFMYIGQLDF FLRECPKGMK TMSTGLFLST LSLGFFLSTA LVTIVHKVTG
501: SGGKGAWLTD DLNKGKLYNF YWLLVALSTL NLVAFVAASR GYVYKETRTS VDDAQGVELE QQA
Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.