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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d018799_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12110.1 Zm00001d018799_P001 AT1G30270.1 19766570
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029932_P001 Maize plasma membrane 90.48 89.41
EER91957 Sorghum plasma membrane 89.29 88.24
Os10t0554200-02 Rice plasma membrane 86.05 84.9
TraesCS1D01G214300.1 Wheat plasma membrane 84.35 83.36
TraesCS1B01G225000.1 Wheat plasma membrane 84.18 83.19
TraesCS1A01G211000.1 Wheat cytosol 83.84 82.86
TraesCS1D01G214200.1 Wheat plasma membrane 83.33 82.21
TraesCS1A01G210900.1 Wheat plasma membrane 67.35 81.99
TraesCS1B01G224900.1 Wheat plasma membrane 82.99 81.88
HORVU1Hr1G053990.4 Barley peroxisome 83.16 79.25
HORVU1Hr1G054020.3 Barley mitochondrion, peroxisome, plastid 63.1 67.95
Zm00001d027285_P001 Maize cytosol, plasma membrane, vacuole 69.22 67.83
GSMUA_Achr8P11190_001 Banana peroxisome 64.97 67.61
GSMUA_Achr11P... Banana plasma membrane 64.29 66.67
GSMUA_Achr8P11180_001 Banana peroxisome 63.78 65.91
KRH28055 Soybean plasma membrane 65.14 65.36
KRH77380 Soybean cytosol, plasma membrane, plastid 64.97 65.19
Zm00001d024587_P001 Maize plasma membrane 66.5 64.31
CDY30051 Canola cytosol, peroxisome, plasma membrane 37.59 63.32
PGSC0003DMT400012226 Potato cytosol, peroxisome, plasma membrane 62.93 62.71
Solyc08g078950.2.1 Tomato cytosol, peroxisome, plasma membrane 62.59 62.37
PGSC0003DMT400032493 Potato cytosol, peroxisome, plasma membrane 61.73 61.53
GSMUA_Achr11P... Banana peroxisome 58.84 61.46
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 61.39 61.19
CDY69100 Canola plasma membrane 34.52 61.14
KRH04097 Soybean peroxisome 61.73 61.11
Bra019744.1-P Field mustard plasma membrane 27.72 60.82
CDY15967 Canola plasma membrane 59.18 60.63
CDY26539 Canola plasma membrane 59.01 60.45
Bra026991.1-P Field mustard plasma membrane 60.54 60.44
AT1G12110.1 Thale cress plasma membrane 60.37 60.17
Bra016789.1-P Field mustard plasma membrane 59.86 59.66
CDY21035 Canola plasma membrane 58.33 59.65
CDY31242 Canola plasma membrane 57.99 59.3
VIT_02s0154g00260.t01 Wine grape plastid 64.46 58.85
KRH57369 Soybean plasma membrane 58.5 58.31
Solyc06g060620.2.1 Tomato plasma membrane 57.31 56.93
PGSC0003DMT400035882 Potato plasma membrane 56.63 56.25
Zm00001d044529_P001 Maize cytosol, peroxisome, plasma membrane 51.19 50.93
Zm00001d009399_P001 Maize cytosol, peroxisome, plasma membrane 49.83 49.58
Zm00001d016982_P001 Maize plasma membrane 48.64 47.99
Zm00001d036942_P001 Maize plasma membrane 32.48 35.37
Zm00001d003603_P001 Maize plasma membrane 35.37 35.25
Zm00001d043463_P001 Maize plasma membrane 32.14 34.55
Zm00001d046383_P001 Maize plasma membrane 34.52 34.29
Zm00001d036941_P001 Maize plasma membrane 35.37 34.15
Zm00001d007255_P001 Maize plasma membrane 35.2 33.23
Zm00001d040201_P001 Maize plasma membrane 37.07 32.98
Zm00001d003208_P001 Maize plasma membrane 24.83 31.81
Zm00001d041163_P001 Maize plasma membrane 31.12 31.77
Zm00001d004621_P001 Maize plasma membrane 25.0 30.25
Zm00001d049349_P001 Maize mitochondrion 33.33 27.34
Zm00001d025748_P001 Maize plasma membrane 24.32 26.05
Protein Annotations
Gene3D:1.20.1250.20EntrezGene:103637665MapMan:24.2.2.9UniProt:A0A1D6K8L2GO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006857GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085InterPro:MFS_trans_sfProteinID:ONL99861.1PFAM:PF00854InterPro:POT_fam
ScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF136InterPro:PTR2_symporter_CSSUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI000221E723EnsemblPlantsGene:Zm00001d029933EnsemblPlants:Zm00001d029933_P001EnsemblPlants:Zm00001d029933_T001SEG:seg:
Description
Protein NRT1/ PTR FAMILY 6.3
Coordinates
chr1:-:95012189..95014753
Molecular Weight (calculated)
62932.9 Da
IEP (calculated)
8.331
GRAVY (calculated)
0.411
Length
588 amino acids
Sequence
(BLAST)
001: MADVQPESGP DGKALMDAWD YKGRPASRAT TGGWACAAMT LGVELFERMT TLGIAVNLVP YMTGTMHLGN AAAANTVTNF IGASFMLCLL GGFVADTYLG
101: RYLTIAIFTA VQATGVVILT ISTAAPGLRP PACGAASPNC VRANKTQLGV LYLGLYLTAL GTGGLKSSVS GFGSDQFDEA HDVERNKMLR FFNWFYFFVS
201: IGALLAVTVL VYVQDNAGRR WGYGVCAAGI LCGLAVFLLG TRKYRFRKLV GSPLTQVAAV TVAAWSKRAL PLPSDPDMLY DVDDVAAAGS DAKGKQKLPH
301: SKECRLLDHA AIVGGGESPA TASKWALCTR TDVEEVKQVV RMLPIWATTI MFWTIHAQMT TFSVAQAEVM NRAIGGSGYL IPAGSLTVFL IGSILLTVPA
401: YDRLVAPVAH RLTGNPHGLT PLQRVFVGLL LSVAGMAVAA LIERHRQTTS ELGVTITVFL LMPQFVLVGA GEAFTYMGQL AFFLRECPKG MKTMSTGLFL
501: STCAFGFFFS TLLVTIVHKV TGHGGRGGWL ADNIDDGRLD YFYWLLAVIS AINLVLFTFA ARGYVYKEKR LADAGIELAD EECVAAGH
Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.