Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| OQU88438 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12110.1 | OQU88438 | AT1G30270.1 | 19766570 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029932_P001 | Maize | plasma membrane | 93.11 | 93.11 |
| Zm00001d029933_P001 | Maize | cytosol, peroxisome, plasma membrane | 88.24 | 89.29 |
| Os10t0554200-02 | Rice | plasma membrane | 86.39 | 86.24 |
| TraesCS1A01G211000.1 | Wheat | cytosol | 84.54 | 84.54 |
| TraesCS1D01G214200.1 | Wheat | plasma membrane | 84.37 | 84.23 |
| TraesCS1D01G214300.1 | Wheat | plasma membrane | 84.2 | 84.2 |
| TraesCS1B01G225000.1 | Wheat | plasma membrane | 84.2 | 84.2 |
| TraesCS1B01G224900.1 | Wheat | plasma membrane | 84.2 | 84.06 |
| TraesCS1A01G210900.1 | Wheat | plasma membrane | 68.24 | 84.06 |
| HORVU1Hr1G053990.4 | Barley | peroxisome | 83.36 | 80.39 |
| OQU93471 | Sorghum | plasma membrane | 70.25 | 69.09 |
| HORVU1Hr1G054020.3 | Barley | mitochondrion, peroxisome, plastid | 63.03 | 68.68 |
| GSMUA_Achr8P11190_001 | Banana | peroxisome | 64.87 | 68.32 |
| GSMUA_Achr11P... | Banana | plasma membrane | 65.04 | 68.25 |
| GSMUA_Achr8P11180_001 | Banana | peroxisome | 65.04 | 68.01 |
| EES13374 | Sorghum | plasma membrane | 68.24 | 67.55 |
| KRH28055 | Soybean | plasma membrane | 64.54 | 65.53 |
| KRH77380 | Soybean | cytosol, plasma membrane, plastid | 64.37 | 65.36 |
| PGSC0003DMT400012226 | Potato | cytosol, peroxisome, plasma membrane | 64.2 | 64.75 |
| Solyc08g078950.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 64.2 | 64.75 |
| CDY30051 | Canola | cytosol, peroxisome, plasma membrane | 37.82 | 64.47 |
| GSMUA_Achr11P... | Banana | peroxisome | 60.67 | 64.12 |
| PGSC0003DMT400032493 | Potato | cytosol, peroxisome, plasma membrane | 62.52 | 63.05 |
| Bra019744.1-P | Field mustard | plasma membrane | 28.24 | 62.69 |
| Solyc08g007430.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 61.85 | 62.37 |
| CDY15967 | Canola | plasma membrane | 60.17 | 62.37 |
| KRH04097 | Soybean | peroxisome | 62.02 | 62.12 |
| AT1G12110.1 | Thale cress | plasma membrane | 61.51 | 62.03 |
| CDY26539 | Canola | plasma membrane | 59.83 | 62.02 |
| Bra026991.1-P | Field mustard | plasma membrane | 61.34 | 61.97 |
| CDY69100 | Canola | plasma membrane | 34.45 | 61.75 |
| CDY21035 | Canola | plasma membrane | 59.33 | 61.39 |
| Bra016789.1-P | Field mustard | plasma membrane | 60.84 | 61.36 |
| CDY31242 | Canola | plasma membrane | 58.82 | 60.87 |
| VIT_02s0154g00260.t01 | Wine grape | plastid | 65.55 | 60.56 |
| Solyc06g060620.2.1 | Tomato | plasma membrane | 58.82 | 59.12 |
| KRH57369 | Soybean | plasma membrane | 58.49 | 58.98 |
| PGSC0003DMT400035882 | Potato | plasma membrane | 57.98 | 58.28 |
| KXG32694 | Sorghum | cytosol | 50.92 | 51.62 |
| EES05323 | Sorghum | plasma membrane | 50.59 | 50.42 |
| EES12219 | Sorghum | plasma membrane | 36.97 | 37.35 |
| OQU83190 | Sorghum | plasma membrane | 34.45 | 36.22 |
| EER89980 | Sorghum | plasma membrane | 35.97 | 35.55 |
| EES15876 | Sorghum | plasma membrane | 33.11 | 35.05 |
| EES15877 | Sorghum | plasma membrane | 33.45 | 34.79 |
| OQU83318 | Sorghum | mitochondrion, plasma membrane | 29.58 | 34.31 |
| EES15875 | Sorghum | plasma membrane | 32.6 | 34.09 |
| OQU87541 | Sorghum | cytosol, peroxisome, plasma membrane | 34.96 | 33.93 |
| KXG24751 | Sorghum | peroxisome, plasma membrane, vacuole | 34.12 | 33.72 |
| OQU81850 | Sorghum | plasma membrane | 31.09 | 33.64 |
| EES00465 | Sorghum | plastid | 37.48 | 33.43 |
| OQU81851 | Sorghum | plasma membrane | 31.26 | 33.04 |
| KXG26617 | Sorghum | plasma membrane | 31.26 | 31.58 |
| EES14657 | Sorghum | plasma membrane | 29.24 | 30.53 |
| KXG28299 | Sorghum | plasma membrane | 29.58 | 30.5 |
| EES11151 | Sorghum | plasma membrane | 29.75 | 30.41 |
| EES19057 | Sorghum | plastid | 12.44 | 29.6 |
| EES12425 | Sorghum | plasma membrane | 23.53 | 25.74 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | EntrezGene:8058104 | UniProt:C5WSH8 | EnsemblPlants:EER91957 | ProteinID:EER91957 |
| ProteinID:EER91957.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006857 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:MFS_trans_sf |
| PFAM:PF00854 | InterPro:POT_fam | ScanProsite:PS01022 | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF136 | InterPro:PTR2_symporter_CS |
| EnsemblPlantsGene:SORBI_3001G302800 | SUPFAM:SSF103473 | unigene:Sbi.9223 | TMHMM:TMhelix | UniParc:UPI0001A824CB | RefSeq:XP_002464959.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:58608119..58612680
Molecular Weight (calculated)
63592.5 Da
IEP (calculated)
8.252
GRAVY (calculated)
0.406
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVLPDTAS DGKALTDAWD YKGRPASRAT TGGWACAAMI LGVELFERMT TLGIAVNLVP YMTGTMHLGN ASAANTVTNF IGASFMLCLL GGFVADTYLG
101: RYLTIAVFTA VQATGVMILT ISTAAPGLRP PPCGDARGAS ADCVPATGTQ LGVLYLGLYL TALGTGGLKS SVSGFGSDQF DESHDGERSK MLRFFNWFYF
201: FVSIGALLAV TALVYVQDNV GRRWGYGVCA VGILCGLAVF LLGTRRYRFK KLVGSPLTQV AAVTAAAWTK RRLPLPSDPD LLYDVDAALA AGADVKGKEK
301: LPHSKECRFL DHAAIIDGTG GDSAASKWAL CTRTDVEEVK QVVRMLPIWA TTIMFWTIHA QMTTFSVAQA EVMDRAIGGS SGFHIPAGSL TVFLIGSILL
401: TVPVYDRLVA PLARRVTGNP HGLTPLQRVF VGLFLSVAGM AVAALVERHR QTAASAEHGV TLSVFLLMPQ FVLVGAGEAF TYMGQLAFFL RECPKGMKTM
501: STGLFLSTCA LGFFFSTLLV TIVHKVTGRH GGRGGWLADN LDDGRLDYFY WLLAVISAIN LVIFTFAARG YVYKEKRLAD AGIELADEES IAVGH
101: RYLTIAVFTA VQATGVMILT ISTAAPGLRP PPCGDARGAS ADCVPATGTQ LGVLYLGLYL TALGTGGLKS SVSGFGSDQF DESHDGERSK MLRFFNWFYF
201: FVSIGALLAV TALVYVQDNV GRRWGYGVCA VGILCGLAVF LLGTRRYRFK KLVGSPLTQV AAVTAAAWTK RRLPLPSDPD LLYDVDAALA AGADVKGKEK
301: LPHSKECRFL DHAAIIDGTG GDSAASKWAL CTRTDVEEVK QVVRMLPIWA TTIMFWTIHA QMTTFSVAQA EVMDRAIGGS SGFHIPAGSL TVFLIGSILL
401: TVPVYDRLVA PLARRVTGNP HGLTPLQRVF VGLFLSVAGM AVAALVERHR QTAASAEHGV TLSVFLLMPQ FVLVGAGEAF TYMGQLAFFL RECPKGMKTM
501: STGLFLSTCA LGFFFSTLLV TIVHKVTGRH GGRGGWLADN LDDGRLDYFY WLLAVISAIN LVIFTFAARG YVYKEKRLAD AGIELADEES IAVGH
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.