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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plastid 1
  • peroxisome 1
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr4P23000_001
GSMUA_Achr4P31540_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12110.1 GSMUA_Achr4P23000_001 AT1G30270.1 19766570
AT1G12110.1 GSMUA_Achr4P31540_001 AT1G30270.1 19766570
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P11190_001 Banana peroxisome 85.19 85.49
GSMUA_Achr8P11180_001 Banana peroxisome 85.54 85.24
GSMUA_Achr11P... Banana peroxisome 75.31 75.84
GSMUA_Achr1P20240_001 Banana plasma membrane 74.78 71.5
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 72.66 70.55
PGSC0003DMT400012226 Potato cytosol, peroxisome, plasma membrane 71.78 68.98
Solyc08g078950.2.1 Tomato cytosol, peroxisome, plasma membrane 71.08 68.31
CDY30051 Canola cytosol, peroxisome, plasma membrane 40.56 65.9
Os10t0554200-02 Rice plasma membrane 68.96 65.6
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 68.25 65.59
PGSC0003DMT400032493 Potato cytosol, peroxisome, plasma membrane 68.08 65.42
Bra019744.1-P Field mustard plasma membrane 30.86 65.3
EER91957 Sorghum plasma membrane 68.25 65.04
KRH04097 Soybean peroxisome 68.08 64.98
TraesCS1D01G214200.1 Wheat plasma membrane 68.08 64.77
TraesCS1B01G224900.1 Wheat plasma membrane 68.08 64.77
GSMUA_Achr6P36750_001 Banana plasma membrane 75.48 64.75
Zm00001d029932_P001 Maize plasma membrane 67.9 64.71
TraesCS4D01G361500.1 Wheat peroxisome 69.14 64.69
KRH28055 Soybean plasma membrane 66.67 64.51
CDY69100 Canola plasma membrane 37.74 64.46
TraesCS1A01G211000.1 Wheat cytosol 67.55 64.37
TraesCS5A01G537100.1 Wheat peroxisome 69.14 64.37
Zm00001d029933_P001 Maize cytosol, peroxisome, plasma membrane 66.67 64.29
TraesCS4B01G375800.1 Wheat plasma membrane 68.78 64.25
TraesCS1B01G225000.1 Wheat plasma membrane 67.37 64.2
TraesCS1D01G214300.1 Wheat plasma membrane 67.37 64.2
Os03t0103000-01 Rice cytosol, peroxisome, plasma membrane 66.67 64.18
VIT_02s0154g00260.t01 Wine grape plastid 72.84 64.13
TraesCS4B01G371000.1 Wheat peroxisome 68.08 64.01
KRH77380 Soybean cytosol, plasma membrane, plastid 65.78 63.65
Zm00001d027285_P001 Maize cytosol, plasma membrane, vacuole 66.84 63.17
OQU93471 Sorghum plasma membrane 67.2 62.98
Solyc06g060620.2.1 Tomato plasma membrane 65.61 62.84
HORVU1Hr1G053990.4 Barley peroxisome 68.08 62.56
HORVU4Hr1G088020.4 Barley nucleus, plasma membrane 68.43 62.48
TraesCS1A01G210900.1 Wheat plasma membrane 53.09 62.32
PGSC0003DMT400035882 Potato plasma membrane 64.9 62.16
CDY21035 Canola plasma membrane 62.43 61.57
CDY31242 Canola plasma membrane 62.26 61.39
CDY26539 Canola plasma membrane 61.9 61.15
CDY15967 Canola plasma membrane 61.73 60.98
Bra016789.1-P Field mustard plasma membrane 63.32 60.85
KRH57369 Soybean plasma membrane 63.14 60.68
Bra026991.1-P Field mustard plasma membrane 62.61 60.27
AT1G12110.1 Thale cress plasma membrane 62.26 59.83
GSMUA_Achr6P05170_001 Banana plasma membrane 57.85 56.65
GSMUA_Achr3P05990_001 Banana cytosol, plasma membrane, plastid 49.91 49.3
GSMUA_Achr9P14440_001 Banana plasma membrane 17.46 48.77
GSMUA_Achr7P08300_001 Banana plasma membrane 57.5 48.44
HORVU1Hr1G054020.3 Barley mitochondrion, peroxisome, plastid 46.56 48.35
GSMUA_Achr4P30700_001 Banana plasma membrane 55.56 45.85
GSMUA_Achr7P08880_001 Banana plasma membrane 35.27 36.17
GSMUA_Achr10P... Banana plasma membrane 34.74 34.93
GSMUA_Achr8P08410_001 Banana plasma membrane 35.1 33.79
GSMUA_Achr5P16920_001 Banana plasma membrane 32.8 33.39
GSMUA_Achr2P16840_001 Banana plasma membrane, plastid 35.45 33.33
GSMUA_Achr6P07370_001 Banana plasma membrane 32.63 33.04
GSMUA_Achr9P08330_001 Banana plasma membrane 32.98 32.02
GSMUA_Achr6P00820_001 Banana plasma membrane 35.63 31.96
GSMUA_Achr9P01100_001 Banana cytosol, peroxisome, plasma membrane 33.33 31.76
GSMUA_Achr6P29080_001 Banana plasma membrane 32.8 31.53
GSMUA_AchrUn_... Banana plasma membrane 10.05 30.81
GSMUA_Achr8P29280_001 Banana plasma membrane 31.75 28.26
GSMUA_Achr11P... Banana plasma membrane 28.4 24.36
Protein Annotations
MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006857
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr11G04310_001
EnsemblPlants:GSMUA_Achr11P04310_001EnsemblPlants:GSMUA_Achr11T04310_001UniProt:M0RPB1InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_fam
ScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF142InterPro:PTR2_symporter_CSSUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI000294A051SEG:seg::::
Description
Nitrate transporter 1.1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G04310_001]
Coordinates
chr11:-:3177202..3181382
Molecular Weight (calculated)
61416.0 Da
IEP (calculated)
8.775
GRAVY (calculated)
0.350
Length
567 amino acids
Sequence
(BLAST)
001: MASLPETAEE GKTLADAWDF KGRPAVKSTT GGWTSAAMIL GVELCERMTT LGIAVNLVTY LTGTMHLGNA ASANVVTNFL GTSFMLCLLG GFVADTYLGR
101: YLTIAIFTAI QASGVTILTI STAAPGLRPP ECSNPLGGGC VTANGTQLGV LYLGLYLTAL GTGGLKSSVS GFGSDQFDEG DRAEKKQMMR FFSWFFFFIS
201: IGALMAVTVL VYIQDNVGRR WGYGICAVAI VAGLAVFLSG TSRYRFKRLV GSPLSQIASV VVSAWRKRRL DVPDSSMLHD IDTAEGCSAP YSNKKKQRLL
301: HTKQFRFLDR AAIVEGDATV DQTKWRLSTL TDVEEVKQVI RMLPTWATTI MFWTVYAQMT TFSVSQATTM DRHIGPSFEI PAGSLTVFFV GSILITRIAV
401: GLVLSIVAMC AAALTERKRL RAARTDPTAA VVPLTVFWLV PQFLLVGAGE AFTYIGQLDF FLRECPKGMK TMSTGLFLST LSLGFFLSST LVTIVHKVTG
501: ESGKGAWLPD NLNKGKLYDF YWLLAVLSVL NLVVFAAAAR GYVYKEKRMG DESVNGVELA EEACCHA
Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.