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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plastid 1
  • peroxisome 1
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_11s0016g05170.t01 Wine grape plasma membrane 71.5 71.88
Solyc07g032490.2.1 Tomato plasma membrane 68.91 70.12
Solyc01g096880.2.1 Tomato plasma membrane 69.43 70.03
PGSC0003DMT400070732 Potato plasma membrane 69.08 69.57
PGSC0003DMT400075163 Potato plasma membrane 69.26 69.14
KRH03705 Soybean plasma membrane 68.91 68.21
GSMUA_Achr4P30700_001 Banana plasma membrane 80.83 68.12
KRH20280 Soybean plasma membrane 68.22 67.99
AT2G26690.1 Thale cress plasma membrane 66.67 66.9
GSMUA_Achr7P08300_001 Banana plasma membrane 76.68 65.97
TraesCS1A01G031300.1 Wheat peroxisome 65.28 64.95
CDY45207 Canola golgi, plasma membrane 65.8 64.91
Bra012052.1-P Field mustard plasma membrane 58.38 64.88
HORVU1Hr1G004720.4 Barley plasma membrane 64.59 64.82
TraesCS1B01G038700.1 Wheat peroxisome 64.77 64.43
CDX71495 Canola plasma membrane 66.67 64.33
TraesCS1D01G032700.1 Wheat peroxisome 64.42 64.09
KXG32694 Sorghum cytosol 64.94 64.05
CDY30787 Canola mitochondrion 65.98 63.56
Zm00001d044529_P001 Maize cytosol, peroxisome, plasma membrane 64.59 63.28
Zm00001d009399_P001 Maize cytosol, peroxisome, plasma membrane 63.39 62.1
Solyc08g061020.1.1 Tomato plasma membrane 32.12 62.0
Solyc08g061010.2.1 Tomato plasma membrane 27.12 59.02
GSMUA_Achr11P... Banana plasma membrane 56.65 57.85
GSMUA_Achr8P11190_001 Banana peroxisome 55.61 56.99
GSMUA_Achr8P11180_001 Banana peroxisome 55.61 56.59
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 56.65 56.16
GSMUA_Achr1P20240_001 Banana plasma membrane 56.3 54.97
GSMUA_Achr11P... Banana peroxisome 51.99 53.46
GSMUA_Achr3P05990_001 Banana cytosol, plasma membrane, plastid 49.22 49.65
GSMUA_Achr6P36750_001 Banana plasma membrane 56.3 49.32
GSMUA_Achr9P14440_001 Banana plasma membrane 16.06 45.81
GSMUA_Achr7P08880_001 Banana plasma membrane 36.27 37.97
GSMUA_Achr10P... Banana plasma membrane 35.23 36.17
GSMUA_Achr5P16920_001 Banana plasma membrane 34.54 35.91
GSMUA_Achr8P08410_001 Banana plasma membrane 36.27 35.65
GSMUA_Achr2P16840_001 Banana plasma membrane, plastid 36.96 35.49
GSMUA_Achr6P07370_001 Banana plasma membrane 33.68 34.82
GSMUA_Achr9P08330_001 Banana plasma membrane 34.72 34.42
GSMUA_AchrUn_... Banana plasma membrane 10.88 34.05
GSMUA_Achr6P29080_001 Banana plasma membrane 34.54 33.9
GSMUA_Achr9P01100_001 Banana cytosol, peroxisome, plasma membrane 34.37 33.45
GSMUA_Achr6P00820_001 Banana plasma membrane 36.44 33.39
GSMUA_Achr8P29280_001 Banana plasma membrane 33.51 30.46
GSMUA_Achr11P... Banana plasma membrane 28.67 25.11
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006857GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:GSMUA_Achr6G05170_001EnsemblPlants:GSMUA_Achr6P05170_001EnsemblPlants:GSMUA_Achr6T05170_001UniProt:M0T4B5InterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF85InterPro:PTR2_symporter_CSSUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI000295A704SEG:seg:::
Description
Nitrate transporter 1.1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G05170_001]
Coordinates
chr6:+:3495554..3497641
Molecular Weight (calculated)
63150.4 Da
IEP (calculated)
9.440
GRAVY (calculated)
0.338
Length
579 amino acids
Sequence
(BLAST)
001: MSWSVADAVD YKGSPADRTK TGGWIPAMLI LVIEICERLS TLGIGVNLVT YLSGTMHLPS AESANVVSDF MGTSFLLCLL GGFLADAYLG RYLTVAIFSA
101: VQAFGTGMLT VVTKLPQLRP PPCGSSSGAS KCHRANGFQI GLLYLSLYLI ALGTGGLKSS VSGFGTDQFD EKDEKEKSQM AYFFNRFFFF ISTGSLFAVT
201: VLVYIQDEVG RSWSYGICCI SMLLAVVLFL SGTRRYRFKK RSGSPIVHIL QVLVAAFRKR QLKHPANPAF LFEDFPEASR IQHTDKFRFL DKAAIGEEFH
301: GKTSTMNPWR LCSVTRVEEV KMMIQLLPVW ATTIMFWTIY AQMMTFSVEQ ATTMDRSVGS FGIPAGSLNV FFVSAILITL AIYDRVIMPA MKKWKGKQGF
401: TNLQRIGLGL TLSIMAMASA ALTEVKRLSV AREAGKAAAP RGAALPISVF TLVPQFFLVG SGEALIYTGQ LDFFITRSPK GMKTMSTGLF LTTLSLGFFL
501: SSFIVSIVKS VTGGESGQGW LADNINHGRL DYFYGLLAAL SALNLAAFLY CATWIKPENA GDGLEMASAA KNSPAEDKC
Best Arabidopsis Sequence Match ( AT2G26690.1 )
(BLAST)
001: MESKGSWTVA DAVDYKGRPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSTSANI VTDFMGTSFL LCLLGGFLAD SFLGRFKTIG
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC
Arabidopsis Description
NPF6.2Protein NRT1/ PTR FAMILY 6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.