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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45207 Canola golgi, plasma membrane 95.34 97.61
CDX71495 Canola plasma membrane 96.17 96.33
AT2G26690.1 Thale cress plasma membrane 87.02 90.64
Solyc07g032490.2.1 Tomato plasma membrane 71.05 75.04
PGSC0003DMT400075163 Potato plasma membrane 72.05 74.66
KRH20280 Soybean plasma membrane 71.71 74.18
VIT_11s0016g05170.t01 Wine grape plasma membrane 70.72 73.78
Solyc01g096880.2.1 Tomato plasma membrane 70.05 73.34
KRH03705 Soybean plasma membrane 71.21 73.16
PGSC0003DMT400070732 Potato plasma membrane 69.55 72.7
GSMUA_Achr6P05170_001 Banana plasma membrane 63.56 65.98
TraesCS1D01G032700.1 Wheat peroxisome 61.4 63.4
TraesCS1B01G038700.1 Wheat peroxisome 61.4 63.4
TraesCS1A01G031300.1 Wheat peroxisome 61.23 63.23
HORVU1Hr1G004720.4 Barley plasma membrane 60.57 63.08
Zm00001d044529_P001 Maize cytosol, peroxisome, plasma membrane 61.9 62.94
KXG32694 Sorghum cytosol 61.06 62.52
Zm00001d009399_P001 Maize cytosol, peroxisome, plasma membrane 60.57 61.59
GSMUA_Achr7P08300_001 Banana plasma membrane 66.89 59.73
GSMUA_Achr4P30700_001 Banana plasma membrane 64.06 56.04
CDY30051 Canola cytosol, peroxisome, plasma membrane 31.78 54.73
CDY21035 Canola plasma membrane 49.75 52.0
CDY31242 Canola plasma membrane 49.58 51.83
CDY69100 Canola plasma membrane 28.45 51.51
CDY26539 Canola plasma membrane 49.08 51.39
CDY15967 Canola plasma membrane 48.92 51.22
CDY44319 Canola plasma membrane 35.77 45.65
CDY38629 Canola plasma membrane 35.77 44.89
CDY40277 Canola plasma membrane 16.64 39.22
CDY40278 Canola plasma membrane 35.44 36.47
CDY65523 Canola plastid 19.63 36.42
CDY28437 Canola plasma membrane 35.11 36.13
CDY50182 Canola plasma membrane 35.27 36.05
CDX93764 Canola plasma membrane 35.94 36.0
CDY11649 Canola cytosol, peroxisome, plasma membrane 35.44 35.8
CDY45147 Canola mitochondrion 19.63 35.54
CDY52284 Canola plasma membrane 29.95 34.95
CDY00323 Canola plasma membrane 32.78 34.93
CDX84348 Canola plasma membrane 32.61 34.75
CDY52286 Canola plasma membrane 29.45 34.3
CDY04575 Canola plasma membrane 29.28 33.98
CDY15763 Canola plasma membrane 27.45 33.74
CDY45893 Canola golgi, peroxisome, plasma membrane 26.62 33.54
CDY70795 Canola plasma membrane 17.47 33.23
CDX85654 Canola cytosol, plasma membrane, plastid 34.28 33.12
CDX91126 Canola plastid 34.11 32.96
CDY38765 Canola plasma membrane 35.27 32.62
CDY15100 Canola plasma membrane 30.12 30.99
CDY67653 Canola peroxisome 18.3 30.3
Protein Annotations
MapMan:24.2.2.9GO:A0A078GZW8UniProt:A0A078GZW8EnsemblPlants:CDY30787ProteinID:CDY30787ProteinID:CDY30787.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006857GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00046218001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF85InterPro:PTR2_symporter_CS
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE23B4SEG:seg::
Description
BnaC07g16870DBnaC07g16870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZW8]
Coordinates
chrLK032260:-:396978..403271
Molecular Weight (calculated)
66447.9 Da
IEP (calculated)
9.891
GRAVY (calculated)
0.326
Length
601 amino acids
Sequence
(BLAST)
001: MTKMKNIKRQ KIKAILIKGI TRRKMESKGS WTVADAVDYN GLPADKSKTG GWITAAFILG IEVVERLSTM GIAVNLVTYL METMHLPSSN SANIVTDFMG
101: TSFLLCLLGG FLADSFLGRF KTIAIFSTIQ ALGTGALAVA TKLPELRPPT CHHGETCTTA TAFQMTFLYI ALYLIALGTG GLKSSISGFG SDQFDDKDPK
201: EKAQMAFFFN RFFFIISMGT LMAVTVLVYI QDEVGRSWAY GICTVSMAIA IAVFLSGTKS YRYKKSQGSP VVQIFQIIAA SIRKRKTELP QSIVYLYEDT
301: PEGLRIEHTD QFRMLDKAAV VTEGDFEQTL DGIAIPNPWK LSSVTKVEEV KMMVRLLPIW ATTIIFWTTY AQMITFSVEQ ASTMRRNVGN FQIPAGSLTV
401: FFVAAILITL AFYDRVIMPF WKKWKGKPGF SSLQRMAIGL VLSTVGMAAA AIVEQKRLLV AKSSTQKILP ISVFQLVPQF FLVGSGEAFI YTGQLDFFIT
501: QSPKGMKTMS TGLFLTTLSL GFFVSSFLVS IVKKVTATSV NGGWLADNIN HGRLDLFYWL LAILSGINFV VYVICALWFK PTKGKDSEEM EKGKGFSVED
601: C
Best Arabidopsis Sequence Match ( AT2G26690.1 )
(BLAST)
001: MESKGSWTVA DAVDYKGRPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSTSANI VTDFMGTSFL LCLLGGFLAD SFLGRFKTIG
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC
Arabidopsis Description
NPF6.2Protein NRT1/ PTR FAMILY 6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.