CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

plastid 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023408.1-P	Field mustard	plastid	99.84	99.84
CDX91126	Canola	plastid	99.04	99.04
AT5G13400.1	Thale cress	plasma membrane	94.53	94.23
KRH01794	Soybean	cytosol, peroxisome, plasma membrane	79.1	77.97
VIT_01s0150g00250.t01	Wine grape	cytosol, peroxisome, plasma membrane	79.42	77.19
PGSC0003DMT400072037	Potato	cytosol, peroxisome, plasma membrane	78.62	74.89
GSMUA_Achr9P01100_001	Banana	cytosol, peroxisome, plasma membrane	69.61	72.77
Zm00001d040201_P001	Maize	plasma membrane	72.51	68.23
EES00465	Sorghum	plastid	73.15	68.22
HORVU3Hr1G014510.3	Barley	plastid	69.45	66.26
TraesCS3B01G095900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	69.13	66.15
TraesCS3D01G081100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	69.13	65.75
TraesCS3A01G081100.3	Wheat	cytosol, peroxisome, plasma membrane, plastid	66.4	65.66
Os01t0103100-01	Rice	plasma membrane	62.7	64.36
EES19057	Sorghum	plastid	24.92	62.0
CDY30051	Canola	cytosol, peroxisome, plasma membrane	21.22	37.82
CDY45207	Canola	golgi, plasma membrane	33.12	35.09
CDY69100	Canola	plasma membrane	18.65	34.94
CDX71495	Canola	plasma membrane	33.28	34.5
CDY30787	Canola	mitochondrion	33.12	34.28
CDY15967	Canola	plasma membrane	31.51	34.15
CDY26539	Canola	plasma membrane	31.35	33.97
CDY44319	Canola	plasma membrane	25.56	33.76
CDY31242	Canola	plasma membrane	30.87	33.39
CDY21035	Canola	plasma membrane	30.87	33.39
CDY38629	Canola	plasma membrane	25.56	33.19
CDY65523	Canola	plastid	16.72	32.1
CDY45147	Canola	mitochondrion	17.04	31.93
CDX93764	Canola	plasma membrane	30.55	31.67
CDY50182	Canola	plasma membrane	29.9	31.63
CDY11649	Canola	cytosol, peroxisome, plasma membrane	30.23	31.6
CDY52284	Canola	plasma membrane	25.72	31.07
CDY45893	Canola	golgi, peroxisome, plasma membrane	23.79	31.03
CDY52286	Canola	plasma membrane	25.56	30.81
CDY40278	Canola	plasma membrane	28.46	30.31
CDY00323	Canola	plasma membrane	27.33	30.14
CDY28437	Canola	plasma membrane	28.3	30.14
CDX84348	Canola	plasma membrane	27.17	29.96
CDY15763	Canola	plasma membrane	23.47	29.86
CDY04575	Canola	plasma membrane	24.6	29.54
CDY40277	Canola	plasma membrane	11.9	29.02
CDY38765	Canola	plasma membrane	30.23	28.92
CDY70795	Canola	plasma membrane	14.15	27.85
CDY67653	Canola	peroxisome	16.24	27.82
CDY15100	Canola	plasma membrane	25.56	27.23

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:A0A078DBG6	EnsemblPlants:CDX85654	ProteinID:CDX85654	ProteinID:CDX85654.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006857	GO:GO:0008150
GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00143387001	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF112
InterPro:PTR2_symporter_CS	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0004EE7F00	SEG:seg	:

Description

BnaA02g01590D

Coordinates

chrLK031842:+:1025777..1028048

Molecular Weight (calculated)

68984.2 Da

IEP (calculated)

8.489

GRAVY (calculated)

0.331

Length

622 amino acids

Sequence
(BLAST)

001: MVVSEIKSPL TPGGCSSSSV HRKELSVFFL ESDNRRLALG RGYTGGTTPV NIHGKPIANL SKTGGWIAAL FIFGNEMAER MAYFGLSVNM VAFMFYVMHR
101: PFESSSNAVN NFLGISQASS VLGGFLADAY LGRYWTIAIF TTMYLLGLIG ITLGASLKMF VPDQSNCDQL SLLLGNCQPA KSWQMLYLYT VLYITGFGAA
201: GIRPCVSSFG ADQFDEKSKE YKTHLDRFFN FFYLSVTLGA IIAFTLVVYV QMEHGWGMAF GTLAIAMAIS NALFFAGTPL YRHRLPGGSP LTRVAQVLVA
301: AFRKRGAAFT SSEFVGLYEV PGLKSAINGS RKIPHTEDFR WLDKAALQLK EDGLEPSPWK LCTVTQVEEV KILIRLIPIP ACTVMLSLVL TEYLTLSVQQ
401: AYTLNTHIQH LKLPVTCMPV FPGLSIFLIL SLYYSVFVPI TRRITGNPHG ASQLQRVGIG LAVSIISVAW AGLFENYRRH YAIQHGFEFN FLTQMPDLTA
501: YWLLIQYCLI GIAEVFCIVG LLEFLYEEAP DAMKSIGSAY AALAGGLGCF AATILNNIVK AATRNSDGNS WLSQNINTGR FDCLYWLLTL LSLLNFCVFL
601: WSAHRYKYRA VETEEDKSRT YL

Best Arabidopsis Sequence Match ( AT5G13400.1 )
(BLAST)

001: MVASEIKSPV SVPETPGSSS VHHRKQLSVF FIESDNRRLA LGRGYTGGTT PVNIHGKPIA NLSKTGGWIA AFFIFGNEMA ERMAYFGLSV NMVAFMFYVM
101: HRPFESSSNA VNNFLGISQA SSVLGGFLAD AYLGRYWTIA IFTTMYLVGL IGITLGASLK MFVPDQSNCG QLSLLLGNCE EAKSWQMLYL YTVLYITGFG
201: AAGIRPCVSS FGADQFDEKS KDYKTHLDRF FNFFYLSVTL GAIIAFTLVV YVQMELGWGM AFGTLAVAMG ISNALFFAGT PLYRHRLPGG SPLTRVAQVL
301: VAAFRKRNAA FTSSEFIGLY EVPGLKSAIN GSRKIPHSND FIWLDKAALE LKEDGLEPSP WKLCTVTQVE EVKILIRLIP IPTCTIMLSL VLTEYLTLSV
401: QQAYTLNTHI QHLKLPVTCM PVFPGLSIFL ILSLYYSVFV PITRRITGNP HGASQLQRVG IGLAVSIISV AWAGLFENYR RHYAIQNGFE FNFLTQMPDL
501: TAYWLLIQYC LIGIAEVFCI VGLLEFLYEE APDAMKSIGS AYAALAGGLG CFAATILNNI VKAATRDSDG KSWLSQNINT GRFDCLYWLL TLLSFLNFCV
601: FLWSAHRYKY RAIESEEDKS SAVL

Arabidopsis Description

NPF6.1Protein NRT1/ PTR FAMILY 6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYR6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.