CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40277	Canola	plasma membrane	43.49	99.61
CDY40278	Canola	plasma membrane	98.8	98.8
AT1G27040.1	Thale cress	plasma membrane	79.45	81.83
CDY11649	Canola	cytosol, peroxisome, plasma membrane	75.34	73.95
CDY38765	Canola	plasma membrane	75.17	67.54
GSMUA_Achr7P08880_001	Banana	plasma membrane	62.33	65.82
Os06t0581000-01	Rice	plasma membrane	65.07	64.41
Zm00001d046383_P001	Maize	plasma membrane	64.55	63.68
TraesCS7A01G365100.1	Wheat	plasma membrane	63.18	62.86
EER89980	Sorghum	plasma membrane	64.55	62.62
Zm00001d036942_P001	Maize	plasma membrane	57.19	61.85
Zm00001d036941_P001	Maize	plasma membrane	62.84	60.26
TraesCS7D01G357300.2	Wheat	plasma membrane	63.7	60.19
CDX84348	Canola	plasma membrane	57.71	59.75
CDY00323	Canola	plasma membrane	57.36	59.4
GSMUA_Achr2P16840_001	Banana	plasma membrane, plastid	61.3	59.37
HORVU7Hr1G086170.5	Barley	cytosol, peroxisome, plastid	63.53	58.8
GSMUA_Achr6P00820_001	Banana	plasma membrane	62.67	57.91
TraesCS7B01G262200.1	Wheat	plasma membrane, plastid	63.87	54.06
CDY04575	Canola	plasma membrane	37.67	42.47
CDY15763	Canola	plasma membrane	35.45	42.33
CDY52284	Canola	plasma membrane	36.64	41.55
CDY52286	Canola	plasma membrane	36.13	40.89
CDX93764	Canola	plasma membrane	38.87	37.83
CDY50182	Canola	plasma membrane	37.67	37.41
CDY15100	Canola	plasma membrane	36.3	36.3
CDY45207	Canola	golgi, plasma membrane	35.96	35.78
CDY45893	Canola	golgi, peroxisome, plasma membrane	29.11	35.64
CDY65523	Canola	plastid	19.69	35.49
CDY70795	Canola	plasma membrane	19.18	35.44
CDX71495	Canola	plasma membrane	36.3	35.33
CDY44319	Canola	plasma membrane	28.42	35.24
CDY30051	Canola	cytosol, peroxisome, plasma membrane	21.06	35.24
CDY45147	Canola	mitochondrion	20.03	35.24
CDY30787	Canola	mitochondrion	36.13	35.11
CDY15967	Canola	plasma membrane	34.25	34.84
CDY26539	Canola	plasma membrane	34.08	34.67
CDY38629	Canola	plasma membrane	28.42	34.66
CDY21035	Canola	plasma membrane	34.08	34.61
CDY31242	Canola	plasma membrane	33.9	34.43
CDY69100	Canola	plasma membrane	19.35	34.04
CDY67653	Canola	peroxisome	21.06	33.88
CDX91126	Canola	plastid	30.31	28.46
CDX85654	Canola	cytosol, plasma membrane, plastid	30.14	28.3

Protein Annotations

Gene3D:1.20.1250.20	MapMan:11.1.4.1	MapMan:24.2.2.9	GO:A0A078GTJ1	UniProt:A0A078GTJ1	EnsemblPlants:CDY28437
ProteinID:CDY28437	ProteinID:CDY28437.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00040314001	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
PANTHER:PTHR11654	PANTHER:PTHR11654:SF98	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0004EE03B4	SEG:seg

Description

BnaC07g12650DBnaC07g12650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTJ1]

Coordinates

chrLK032220:-:249620..252680

Molecular Weight (calculated)

64315.4 Da

IEP (calculated)

9.321

GRAVY (calculated)

0.446

Length

584 amino acids

Sequence
(BLAST)

001: MGEIEKMEVE MQGEDSKWEG YADWRNRAAV KGRHGGMLAA SFVLAVEVLE NLAFLANASN LVTYLTEFMH FSLSRAASEV SAFMGTAFLL ALLGGFFSDA
101: FLSTFIVFII SAFIEFMGLI LLTIQARRPS LMPPPCKSSP ASPCEPVHGS KAALLFVGLY LAALGIGGIK GSLPSHGAEQ FDESDPKGRK QRSTFFNYFV
201: FCLSCGALVA VTFVVWLEDN VGWEWGFGVS TISIFLSILV FLSGSRFYKN RIPRGSPLTT ILKVLVVASL MGCSRKSSSN AIENFSMTPS NHLVGEDQLE
301: GAKRDSQSLT NSLRCLNRAV EGKTVHRLLE CTVQQVEDVK IVLKMLPIFG CTIMLNCCLA QLSTFSVRQA ASMNRKIGNL VVPAASLPVF PVVFMLILAP
401: VYDHLIIPFA RRVTKSEMGV SHLQRIGVGL VLSILAMAVA ALVELKRKRV ASEAGLLDSK QALPISFLWI ALQYLFLGSA DLFTLAGLLE FFFTEAPSSM
501: RSLATSLSWA SLAMGFYLNS AMVVIVNKMT RSGGRTPWLG EKLGINRYRL DLFYWLLCIL SVVNLLHYLF WAMRYKYIST GARR

Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)

001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS

Arabidopsis Description

NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.