Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G365100.1 | Wheat | plasma membrane | 86.95 | 87.39 |
| EER89980 | Sorghum | plasma membrane | 88.81 | 87.04 |
| Zm00001d046383_P001 | Maize | plasma membrane | 86.78 | 86.49 |
| TraesCS7D01G357300.2 | Wheat | plasma membrane | 87.29 | 83.33 |
| Zm00001d036942_P001 | Maize | plasma membrane | 74.75 | 81.67 |
| HORVU7Hr1G086170.5 | Barley | cytosol, peroxisome, plastid | 86.95 | 81.3 |
| Zm00001d036941_P001 | Maize | plasma membrane | 83.39 | 80.79 |
| TraesCS7B01G262200.1 | Wheat | plasma membrane, plastid | 87.46 | 74.78 |
| GSMUA_Achr7P08880_001 | Banana | plasma membrane | 69.15 | 73.78 |
| Bra012431.1-P | Field mustard | plasma membrane | 31.19 | 72.16 |
| CDY40277 | Canola | plasma membrane | 31.19 | 72.16 |
| KRG99175 | Soybean | plasma membrane | 69.66 | 70.26 |
| KRH69373 | Soybean | plasma membrane | 68.64 | 69.83 |
| KRH74766 | Soybean | plasma membrane | 68.47 | 69.78 |
| VIT_01s0026g01570.t01 | Wine grape | plasma membrane | 68.64 | 69.23 |
| KRH45840 | Soybean | plasma membrane | 69.66 | 69.19 |
| Solyc05g007000.2.1 | Tomato | plasma membrane | 66.44 | 69.01 |
| PGSC0003DMT400045415 | Potato | plasma membrane | 66.61 | 68.35 |
| KRH45842 | Soybean | plasma membrane | 68.14 | 67.68 |
| PGSC0003DMT400007441 | Potato | plasma membrane | 66.1 | 66.78 |
| Solyc05g006990.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 66.27 | 66.72 |
| AT1G69850.1 | Thale cress | plasma membrane | 65.76 | 66.32 |
| Solyc04g005790.2.1 | Tomato | plasma membrane | 65.25 | 66.27 |
| AT1G27040.1 | Thale cress | plasma membrane | 63.56 | 66.14 |
| CDY11649 | Canola | cytosol, peroxisome, plasma membrane | 66.27 | 65.71 |
| CDY40278 | Canola | plasma membrane | 64.75 | 65.41 |
| GSMUA_Achr2P16840_001 | Banana | plasma membrane, plastid | 66.61 | 65.17 |
| CDY28437 | Canola | plasma membrane | 64.41 | 65.07 |
| GSMUA_Achr6P00820_001 | Banana | plasma membrane | 69.66 | 65.03 |
| KRH56961 | Soybean | plasma membrane | 63.73 | 64.49 |
| KRH03418 | Soybean | plasma membrane | 63.56 | 64.43 |
| PGSC0003DMT400045412 | Potato | mitochondrion | 67.63 | 63.64 |
| VIT_17s0000g05640.t01 | Wine grape | cytosol, plasma membrane, plastid | 65.76 | 63.61 |
| Bra010117.1-P | Field mustard | plasma membrane | 59.32 | 63.06 |
| CDX84348 | Canola | plasma membrane | 59.32 | 62.06 |
| CDY00323 | Canola | plasma membrane | 59.32 | 62.06 |
| PGSC0003DMT400065182 | Potato | plasma membrane | 61.36 | 61.46 |
| CDY38765 | Canola | plasma membrane | 66.78 | 60.62 |
| AT5G62730.1 | Thale cress | plasma membrane | 59.66 | 59.76 |
| Solyc03g113250.2.1 | Tomato | plasma membrane | 55.59 | 53.77 |
| Os04t0491500-02 | Rice | plasma membrane | 39.32 | 41.65 |
| Os08t0155400-01 | Rice | plasma membrane | 34.75 | 39.05 |
| Os11t0235200-01 | Rice | plasma membrane | 39.15 | 36.9 |
| Os04t0441800-01 | Rice | plasma membrane | 37.8 | 36.5 |
| Os10t0554200-02 | Rice | plasma membrane | 36.78 | 36.41 |
| Os02t0580900-01 | Rice | plasma membrane | 37.29 | 36.12 |
| Os03t0103000-01 | Rice | cytosol, peroxisome, plasma membrane | 35.42 | 35.48 |
| Os12t0231000-01 | Rice | plasma membrane | 34.92 | 35.33 |
| Os11t0283500-01 | Rice | plasma membrane | 34.41 | 34.82 |
| Os11t0284300-00 | Rice | mitochondrion | 18.31 | 34.29 |
| Os01t0103100-01 | Rice | plasma membrane | 34.24 | 33.33 |
| Os11t0282800-00 | Rice | plasma membrane | 33.56 | 32.84 |
| Os04t0464400-00 | Rice | peroxisome, plasma membrane | 24.24 | 22.95 |
| Os04t0491200-00 | Rice | plasma membrane, vacuole | 25.25 | 22.75 |
| Os04t0491350-00 | Rice | plasma membrane | 0.34 | 0.43 |
| Os01t0749000-02 | Rice | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:11.1.4.1 | MapMan:24.2.2.9 | EntrezGene:4341378 | ProteinID:BAD68604.1 | ProteinID:BAF19851.1 | ProteinID:BAS98370.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:MFS_trans_sf | EnsemblPlantsGene:Os06g0581000 | EnsemblPlants:Os06t0581000-01 |
| PFAM:PF00854 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF98 | UniProt:Q5VPM1 | SUPFAM:SSF103473 |
| TMHMM:TMhelix | UniParc:UPI0000457F0B | RefSeq:XP_015644286.1 | SEG:seg | : | : |
Description
nitrate transporter 1.2Similar to Nitrate transporter NTL1. (Os06t0581000-01)
Coordinates
chr6:-:22655734..22664963
Molecular Weight (calculated)
63735.9 Da
IEP (calculated)
8.986
GRAVY (calculated)
0.448
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGAAAREA ERWEGYVDWR NRPAVRGRHG GMLAASFVLV VEVLENLAFL ANASNLVTYL MNFMHYSPSQ SATTVTNFMG TAFLLALLGG FLSDAFFTTY
101: AIYLISAFVE FLGLVVLTIQ ARTPSLMPPG CAKVAGAACE PVSGPKKAML FAGLYVTALG IGGIKGSLPS HGAEQFDEHA PRGRKGRSTF FNYFVFCLSV
201: GALIAVTFAV WVEDNKGWQW GFGISTIAIL LSIPVFVAGS RLYRNKVPTG SPLTTIAKVV LAAALARRGG AQSASNGAVI DRAPSPTGST DMKEYCKPGD
301: ICGVADGAAE VATEPSQELV FLNRAVQRQP RCGALSCTVQ EVEDVKIVLM VLPIFFSTIM LNSCLAQLST FSVEQAATMD TRVGGLKVPP ASLPVFPVTF
401: IILLAPVYDH IIIPFARRAT GTEMGITHLQ RIGTGLVLSI VAMAVAAVVE VKRKNVASNA GMLDAAAPLP ITFFWIAFQY LFLGSADLFT LAGLLEFFFS
501: EAPARMRSLA TSLSWASLAL GYYLSSVLVT VVNSATGRGG RRAWLQGENL NHYHLERFYW VMCVLSTLNY LFFLFWAIRY KYRNAGVIKG
101: AIYLISAFVE FLGLVVLTIQ ARTPSLMPPG CAKVAGAACE PVSGPKKAML FAGLYVTALG IGGIKGSLPS HGAEQFDEHA PRGRKGRSTF FNYFVFCLSV
201: GALIAVTFAV WVEDNKGWQW GFGISTIAIL LSIPVFVAGS RLYRNKVPTG SPLTTIAKVV LAAALARRGG AQSASNGAVI DRAPSPTGST DMKEYCKPGD
301: ICGVADGAAE VATEPSQELV FLNRAVQRQP RCGALSCTVQ EVEDVKIVLM VLPIFFSTIM LNSCLAQLST FSVEQAATMD TRVGGLKVPP ASLPVFPVTF
401: IILLAPVYDH IIIPFARRAT GTEMGITHLQ RIGTGLVLSI VAMAVAAVVE VKRKNVASNA GMLDAAAPLP ITFFWIAFQY LFLGSADLFT LAGLLEFFFS
501: EAPARMRSLA TSLSWASLAL GYYLSSVLVT VVNSATGRGG RRAWLQGENL NHYHLERFYW VMCVLSTLNY LFFLFWAIRY KYRNAGVIKG
001: MEVEEEVSRW EGYADWRNRA AVKGRHGGML AASFVLVVEI LENLAYLANA SNLVLYLREY MHMSPSKSAN DVTNFMGTAF LLALLGGFLS DAFFSTFQIF
101: LISASIEFLG LIILTIQART PSLMPPSCDS PTCEEVSGSK AAMLFVGLYL VALGVGGIKG SLASHGAEQF DESTPKGRKQ RSTFFNYFVF CLACGALVAV
201: TFVVWLEDNK GWEWGFGVST IAIFVSILIF LSGSRFYRNK IPCGSPLTTI LKVLLAASVK CCSSGSSSNA VASMSVSPSN HCVSKGKKEV ESQGELEKPR
301: QEEALPPRAQ LTNSLKVLNG AADEKPVHRL LECTVQQVED VKIVLKMLPI FACTIMLNCC LAQLSTFSVQ QAASMNTKIG SLKIPPASLP IFPVVFIMIL
401: APIYDHLIIP FARKATKTET GVTHLQRIGV GLVLSILAMA VAALVEIKRK GVAKDSGLLD SKETLPVTFL WIALQYLFLG SADLFTLAGL LEYFFTEAPS
501: SMRSLATSLS WASLAMGYYL SSVIVSIVNS ITGSSGNTPW LRGKSINRYK LDYFYWLMCV LSAANFLHYL FWAMRYKYRS TGSRS
101: LISASIEFLG LIILTIQART PSLMPPSCDS PTCEEVSGSK AAMLFVGLYL VALGVGGIKG SLASHGAEQF DESTPKGRKQ RSTFFNYFVF CLACGALVAV
201: TFVVWLEDNK GWEWGFGVST IAIFVSILIF LSGSRFYRNK IPCGSPLTTI LKVLLAASVK CCSSGSSSNA VASMSVSPSN HCVSKGKKEV ESQGELEKPR
301: QEEALPPRAQ LTNSLKVLNG AADEKPVHRL LECTVQQVED VKIVLKMLPI FACTIMLNCC LAQLSTFSVQ QAASMNTKIG SLKIPPASLP IFPVVFIMIL
401: APIYDHLIIP FARKATKTET GVTHLQRIGV GLVLSILAMA VAALVEIKRK GVAKDSGLLD SKETLPVTFL WIALQYLFLG SADLFTLAGL LEYFFTEAPS
501: SMRSLATSLS WASLAMGYYL SSVIVSIVNS ITGSSGNTPW LRGKSINRYK LDYFYWLMCV LSAANFLHYL FWAMRYKYRS TGSRS
Arabidopsis Description
NPF4.6Protein NRT1/ PTR FAMILY 4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H157]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.