Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11649 | Canola | cytosol, peroxisome, plasma membrane | 91.45 | 89.92 |
| CDY38765 | Canola | plasma membrane | 91.79 | 82.62 |
| AT1G27040.1 | Thale cress | plasma membrane | 75.38 | 77.78 |
| GSMUA_Achr7P08880_001 | Banana | plasma membrane | 66.15 | 69.98 |
| Os06t0581000-01 | Rice | plasma membrane | 66.32 | 65.76 |
| Zm00001d046383_P001 | Maize | plasma membrane | 66.5 | 65.71 |
| TraesCS7A01G365100.1 | Wheat | plasma membrane | 65.3 | 65.08 |
| EER89980 | Sorghum | plasma membrane | 66.32 | 64.45 |
| Zm00001d036942_P001 | Maize | plasma membrane | 58.63 | 63.52 |
| TraesCS7D01G357300.2 | Wheat | plasma membrane | 65.98 | 62.46 |
| Zm00001d036941_P001 | Maize | plasma membrane | 64.79 | 62.23 |
| GSMUA_Achr2P16840_001 | Banana | plasma membrane, plastid | 63.59 | 61.69 |
| HORVU7Hr1G086170.5 | Barley | cytosol, peroxisome, plastid | 66.15 | 61.33 |
| AT5G62730.1 | Thale cress | plasma membrane | 61.37 | 60.95 |
| GSMUA_Achr6P00820_001 | Banana | plasma membrane | 63.76 | 59.02 |
| TraesCS7B01G262200.1 | Wheat | plasma membrane, plastid | 65.98 | 55.94 |
| AT3G25280.1 | Thale cress | plasma membrane | 36.92 | 41.46 |
| AT3G25260.1 | Thale cress | plasma membrane | 36.24 | 41.16 |
| AT1G33440.1 | Thale cress | plasma membrane | 38.8 | 37.77 |
| AT1G59740.1 | Thale cress | plasma membrane | 38.12 | 37.73 |
| AT2G26690.1 | Thale cress | plasma membrane | 36.24 | 36.74 |
| AT3G21670.1 | Thale cress | plasma membrane | 36.07 | 35.76 |
| AT1G12110.1 | Thale cress | plasma membrane | 35.21 | 34.92 |
| AT5G13400.1 | Thale cress | plasma membrane | 31.62 | 29.65 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:11.1.4.1 | MapMan:24.2.2.9 | EntrezGene:843321 | UniProt:A0A178W7G0 | ProteinID:AAG52554.1 |
| ProteinID:AEE34991.1 | EMBL:AF073361 | ArrayExpress:AT1G69850 | EnsemblPlantsGene:AT1G69850 | RefSeq:AT1G69850 | TAIR:AT1G69850 |
| RefSeq:AT1G69850-TAIR-G | EnsemblPlants:AT1G69850.1 | TAIR:AT1G69850.1 | Symbol:ATNRT1:2 | EMBL:AY062453 | EMBL:BT000720 |
| EMBL:BT002561 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009624 |
| GO:GO:0009987 | GO:GO:0010119 | GO:GO:0015293 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0042128 | GO:GO:0055085 | GO:GO:0080168 | GO:GO:0090440 | InterPro:MFS_trans_sf | RefSeq:NP_564978.1 |
| ProteinID:OAP12992.1 | PFAM:PF00854 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF98 | UniProt:Q8H157 |
| SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI00000ADAE7 | SEG:seg | : | : |
Description
NPF4.6Protein NRT1/ PTR FAMILY 4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H157]
Coordinates
chr1:-:26296540..26300684
Molecular Weight (calculated)
63985.3 Da
IEP (calculated)
8.660
GRAVY (calculated)
0.372
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEEEVSRW EGYADWRNRA AVKGRHGGML AASFVLVVEI LENLAYLANA SNLVLYLREY MHMSPSKSAN DVTNFMGTAF LLALLGGFLS DAFFSTFQIF
101: LISASIEFLG LIILTIQART PSLMPPSCDS PTCEEVSGSK AAMLFVGLYL VALGVGGIKG SLASHGAEQF DESTPKGRKQ RSTFFNYFVF CLACGALVAV
201: TFVVWLEDNK GWEWGFGVST IAIFVSILIF LSGSRFYRNK IPCGSPLTTI LKVLLAASVK CCSSGSSSNA VASMSVSPSN HCVSKGKKEV ESQGELEKPR
301: QEEALPPRAQ LTNSLKVLNG AADEKPVHRL LECTVQQVED VKIVLKMLPI FACTIMLNCC LAQLSTFSVQ QAASMNTKIG SLKIPPASLP IFPVVFIMIL
401: APIYDHLIIP FARKATKTET GVTHLQRIGV GLVLSILAMA VAALVEIKRK GVAKDSGLLD SKETLPVTFL WIALQYLFLG SADLFTLAGL LEYFFTEAPS
501: SMRSLATSLS WASLAMGYYL SSVIVSIVNS ITGSSGNTPW LRGKSINRYK LDYFYWLMCV LSAANFLHYL FWAMRYKYRS TGSRS
101: LISASIEFLG LIILTIQART PSLMPPSCDS PTCEEVSGSK AAMLFVGLYL VALGVGGIKG SLASHGAEQF DESTPKGRKQ RSTFFNYFVF CLACGALVAV
201: TFVVWLEDNK GWEWGFGVST IAIFVSILIF LSGSRFYRNK IPCGSPLTTI LKVLLAASVK CCSSGSSSNA VASMSVSPSN HCVSKGKKEV ESQGELEKPR
301: QEEALPPRAQ LTNSLKVLNG AADEKPVHRL LECTVQQVED VKIVLKMLPI FACTIMLNCC LAQLSTFSVQ QAASMNTKIG SLKIPPASLP IFPVVFIMIL
401: APIYDHLIIP FARKATKTET GVTHLQRIGV GLVLSILAMA VAALVEIKRK GVAKDSGLLD SKETLPVTFL WIALQYLFLG SADLFTLAGL LEYFFTEAPS
501: SMRSLATSLS WASLAMGYYL SSVIVSIVNS ITGSSGNTPW LRGKSINRYK LDYFYWLMCV LSAANFLHYL FWAMRYKYRS TGSRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.