Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40277 | Canola | plasma membrane | 37.57 | 83.53 |
| Bra012431.1-P | Field mustard | plasma membrane | 37.57 | 83.53 |
| CDY40278 | Canola | plasma membrane | 82.54 | 80.14 |
| CDY28437 | Canola | plasma membrane | 81.83 | 79.45 |
| AT1G69850.1 | Thale cress | plasma membrane | 77.78 | 75.38 |
| GSMUA_Achr7P08880_001 | Banana | plasma membrane | 64.9 | 66.55 |
| Os06t0581000-01 | Rice | plasma membrane | 66.14 | 63.56 |
| TraesCS7A01G365100.1 | Wheat | plasma membrane | 65.26 | 63.03 |
| Zm00001d046383_P001 | Maize | plasma membrane | 65.26 | 62.5 |
| EER89980 | Sorghum | plasma membrane | 65.96 | 62.13 |
| Zm00001d036942_P001 | Maize | plasma membrane | 56.97 | 59.81 |
| TraesCS7D01G357300.2 | Wheat | plasma membrane | 65.08 | 59.71 |
| AT5G62730.1 | Thale cress | plasma membrane | 61.73 | 59.42 |
| GSMUA_Achr2P16840_001 | Banana | plasma membrane, plastid | 62.96 | 59.2 |
| Zm00001d036941_P001 | Maize | plasma membrane | 63.32 | 58.95 |
| HORVU7Hr1G086170.5 | Barley | cytosol, peroxisome, plastid | 64.9 | 58.32 |
| GSMUA_Achr6P00820_001 | Banana | plasma membrane | 63.84 | 57.28 |
| TraesCS7B01G262200.1 | Wheat | plasma membrane, plastid | 64.9 | 53.33 |
| AT3G25280.1 | Thale cress | plasma membrane | 38.98 | 42.42 |
| AT3G25260.1 | Thale cress | plasma membrane | 37.92 | 41.75 |
| AT1G33440.1 | Thale cress | plasma membrane | 38.98 | 36.77 |
| AT1G59740.1 | Thale cress | plasma membrane | 37.04 | 35.53 |
| AT2G26690.1 | Thale cress | plasma membrane | 36.16 | 35.53 |
| AT1G12110.1 | Thale cress | plasma membrane | 36.16 | 34.75 |
| AT3G21670.1 | Thale cress | plasma membrane | 35.63 | 34.24 |
| AT5G13400.1 | Thale cress | plasma membrane | 30.86 | 28.04 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:11.1.4.1 | MapMan:24.2.2.9 | EntrezGene:839593 | ProteinID:AAF79877.1 | ProteinID:AEE30771.1 |
| ProteinID:AEE30772.1 | ArrayExpress:AT1G27040 | EnsemblPlantsGene:AT1G27040 | RefSeq:AT1G27040 | TAIR:AT1G27040 | RefSeq:AT1G27040-TAIR-G |
| EnsemblPlants:AT1G27040.1 | TAIR:AT1G27040.1 | EMBL:AY072134 | EMBL:AY096445 | Unigene:At.16283 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0055085 | InterPro:MFS_trans_sf | RefSeq:NP_174024.2 | RefSeq:NP_973919.1 | PFAM:PF00854 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0025022 | PO:PO:0025281 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF98 | UniProt:Q8VYE4 |
| SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI000009DF09 | SEG:seg | : | : |
Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
Coordinates
chr1:-:9386693..9390042
Molecular Weight (calculated)
62656.1 Da
IEP (calculated)
9.167
GRAVY (calculated)
0.453
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.