Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012052.1-P | Field mustard | plasma membrane | 82.15 | 90.98 |
| CDY45207 | Canola | golgi, plasma membrane | 91.51 | 89.95 |
| CDX71495 | Canola | plasma membrane | 91.51 | 88.0 |
| CDY30787 | Canola | mitochondrion | 90.64 | 87.02 |
| Solyc07g032490.2.1 | Tomato | plasma membrane | 74.52 | 75.57 |
| PGSC0003DMT400075163 | Potato | plasma membrane | 75.74 | 75.34 |
| KRH20280 | Soybean | plasma membrane | 75.74 | 75.22 |
| Solyc01g096880.2.1 | Tomato | plasma membrane | 74.7 | 75.09 |
| VIT_11s0016g05170.t01 | Wine grape | plasma membrane | 74.52 | 74.65 |
| KRH03705 | Soybean | plasma membrane | 75.39 | 74.36 |
| PGSC0003DMT400070732 | Potato | plasma membrane | 74.0 | 74.26 |
| GSMUA_Achr6P05170_001 | Banana | plasma membrane | 66.9 | 66.67 |
| TraesCS1B01G038700.1 | Wheat | peroxisome | 64.64 | 64.09 |
| HORVU1Hr1G004720.4 | Barley | plasma membrane | 63.78 | 63.78 |
| TraesCS1A01G031300.1 | Wheat | peroxisome | 64.3 | 63.75 |
| TraesCS1D01G032700.1 | Wheat | peroxisome | 64.12 | 63.57 |
| Zm00001d044529_P001 | Maize | cytosol, peroxisome, plasma membrane | 64.64 | 63.11 |
| KXG32694 | Sorghum | cytosol | 63.78 | 62.69 |
| Zm00001d009399_P001 | Maize | cytosol, peroxisome, plasma membrane | 63.26 | 61.76 |
| GSMUA_Achr7P08300_001 | Banana | plasma membrane | 70.71 | 60.62 |
| GSMUA_Achr4P30700_001 | Banana | plasma membrane | 68.63 | 57.64 |
| AT1G12110.1 | Thale cress | plasma membrane | 52.86 | 51.69 |
| AT3G21670.1 | Thale cress | plasma membrane | 49.39 | 48.31 |
| AT1G69850.1 | Thale cress | plasma membrane | 36.74 | 36.24 |
| AT1G27040.1 | Thale cress | plasma membrane | 35.53 | 36.16 |
| AT1G33440.1 | Thale cress | plasma membrane | 37.44 | 35.94 |
| AT1G59740.1 | Thale cress | plasma membrane | 36.74 | 35.87 |
| AT3G25260.1 | Thale cress | plasma membrane | 31.2 | 34.95 |
| AT3G25280.1 | Thale cress | plasma membrane | 31.37 | 34.74 |
| AT5G62730.1 | Thale cress | plasma membrane | 34.14 | 33.45 |
| AT5G13400.1 | Thale cress | plasma membrane | 35.53 | 32.85 |
Protein Annotations
| MapMan:24.2.2.9 | EntrezGene:817210 | ProteinID:AAB95302.1 | ProteinID:AEC07875.1 | EMBL:AJ011604 | ArrayExpress:AT2G26690 |
| EnsemblPlantsGene:AT2G26690 | RefSeq:AT2G26690 | TAIR:AT2G26690 | RefSeq:AT2G26690-TAIR-G | EnsemblPlants:AT2G26690.1 | TAIR:AT2G26690.1 |
| EMBL:AY099800 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006857 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009611 | GO:GO:0009719 | GO:GO:0009753 |
| GO:GO:0009987 | GO:GO:0015293 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0042128 |
| GO:GO:0055085 | InterPro:MFS_trans_sf | RefSeq:NP_850084.1 | PFAM:PF00854 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | InterPro:POT_fam | ScanProsite:PS01022 |
| PANTHER:PTHR11654 | PANTHER:PTHR11654:SF85 | InterPro:PTR2_symporter_CS | UniProt:Q9SZY4 | SUPFAM:SSF103473 | TMHMM:TMhelix |
| UniParc:UPI00000A6BCB | SEG:seg | : | : | : | : |
Description
NPF6.2Protein NRT1/ PTR FAMILY 6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY4]
Coordinates
chr2:-:11347147..11350993
Molecular Weight (calculated)
63576.1 Da
IEP (calculated)
9.285
GRAVY (calculated)
0.375
Length
577 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKGSWTVA DAVDYKGRPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSTSANI VTDFMGTSFL LCLLGGFLAD SFLGRFKTIG
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.