Factsheet for Zm00001d009399_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	92.22	92.22
TraesCS1B01G038700.1	Wheat	peroxisome	82.57	83.85
TraesCS1D01G032700.1	Wheat	peroxisome	82.23	83.51
TraesCS1A01G031300.1	Wheat	peroxisome	81.9	83.16
HORVU1Hr1G004720.4	Barley	plasma membrane	79.36	81.28
Solyc01g096880.2.1	Tomato	plasma membrane	61.93	63.76
GSMUA_Achr6P05170_001	Banana	plasma membrane	62.1	63.39
Solyc08g061020.1.1	Tomato	plasma membrane	32.15	63.33
PGSC0003DMT400070732	Potato	plasma membrane	61.59	63.3
AT2G26690.1	Thale cress	plasma membrane	61.76	63.26
Solyc07g032490.2.1	Tomato	plasma membrane	60.74	63.09
KRH03705	Soybean	plasma membrane	62.27	62.91
VIT_11s0016g05170.t01	Wine grape	plasma membrane	61.08	62.67
KRH20280	Soybean	plasma membrane	61.42	62.48
CDY45207	Canola	golgi, plasma membrane	61.76	62.18
PGSC0003DMT400075163	Potato	plasma membrane	60.91	62.07
PGSC0003DMT400053569	Potato	endoplasmic reticulum, plasma membrane	27.75	61.65
Bra012052.1-P	Field mustard	plasma membrane	54.15	61.42
CDX71495	Canola	plasma membrane	61.93	61.0
CDY30787	Canola	mitochondrion	61.59	60.57
GSMUA_Achr7P08300_001	Banana	plasma membrane	63.11	55.42
GSMUA_Achr4P30700_001	Banana	plasma membrane	63.96	55.02
Solyc08g061010.2.1	Tomato	plasma membrane	24.53	54.51
Zm00001d024587_P001	Maize	plasma membrane	53.47	51.97
VIT_11s0016g05180.t01	Wine grape	plasma membrane	50.93	51.45
Zm00001d029933_P001	Maize	cytosol, peroxisome, plasma membrane	49.58	49.83
Zm00001d029932_P001	Maize	plasma membrane	50.08	49.75
Zm00001d027285_P001	Maize	cytosol, plasma membrane, vacuole	49.07	48.33
Zm00001d016982_P001	Maize	plasma membrane	47.55	47.15
Zm00001d036942_P001	Maize	plasma membrane	31.81	34.81
Zm00001d003603_P001	Maize	plasma membrane	34.52	34.58
Zm00001d046383_P001	Maize	plasma membrane	34.52	34.46
Zm00001d036941_P001	Maize	plasma membrane	34.69	33.66
Zm00001d043463_P001	Maize	plasma membrane	30.96	33.46
Zm00001d007255_P001	Maize	plasma membrane	34.52	32.74
Zm00001d004621_P001	Maize	plasma membrane	26.23	31.89
Zm00001d040201_P001	Maize	plasma membrane	35.53	31.77
Zm00001d003208_P001	Maize	plasma membrane	23.86	30.72
Zm00001d041163_P001	Maize	plasma membrane	29.78	30.56
Zm00001d049349_P001	Maize	mitochondrion	31.64	26.08
Zm00001d025748_P001	Maize	plasma membrane	23.52	25.32

Protein Annotations

EntrezGene:100383494	MapMan:24.2.2.9	ProteinID:AQK91821.1	EMBL:BT067372	UniProt:C0PGF3	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006857	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF85	InterPro:PTR2_symporter_CS	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI000195CB24	EnsemblPlantsGene:Zm00001d009399	EnsemblPlants:Zm00001d009399_P001	EnsemblPlants:Zm00001d009399_T001	SEG:seg	:

Description

Protein NRT1/ PTR FAMILY 6.2

Coordinates

chr8:-:62579423..62581864

Molecular Weight (calculated)

63843.2 Da

IEP (calculated)

8.199

GRAVY (calculated)

0.421

Length

591 amino acids

Sequence
(BLAST)

001: MDGKKVQERA AWCVSDGGGN LVQDAVDYRG CRADKSSTGG WASAALAVGI ELCERLSTMG IAVNLVTYLT ATMHLPSAAA ANVVTDFMGT SFLLCLLGGF
101: LADSFLGRYL TIAIFAVVQA IGTGLLAVST EVRQLRPPPC GPGAAGPCEQ ATGLQMGVLY VCLYLIALGT GGLKSSVSGF GTDQFDERDA RERAAMGLFF
201: DRFFFFVTFG TLLAVTVLVY VQDHVGRSCA YGICAGAMLV AVAVFLSGTR RYRYKRSSGS PIVHILQVLV AATRKRNIVM QPLTAAALYE DHPEHARIPH
301: TAQFPCLDRA AVMAGDDDNE VGHDGRPTMN PWKLRSVSRV EEVKMVARLM PVWATTILFW TMYAQMITFS VEQATTMDRR MGGFEIPAAS LTVFFVGAIM
401: LTLAFYDRVF VPLCRSLMTG RQGFTNLEKI GIGLVLSTFG MAAAAICEKK RLAVAATSVA VGHGSLPISV FMLTPQFLLV GSGEAFIYTG QLDFFIMRSP
501: KSMKTMSTGL FLTTLSLGFF LSSALVSLVK SCTRWLGDTI NHSRLDYFYW LLAVLGVVNL VAYIVYAMWA AAPASSQAEQ PQHAMAADEK C

Best Arabidopsis Sequence Match ( AT2G26690.1 )
(BLAST)

001: MESKGSWTVA DAVDYKGRPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSTSANI VTDFMGTSFL LCLLGGFLAD SFLGRFKTIG
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC

Arabidopsis Description

NPF6.2Protein NRT1/ PTR FAMILY 6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.