Factsheet for Bra012052.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plastid 1
plasma membrane 3
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45207	Canola	golgi, plasma membrane	100.0	88.76
AT2G26690.1	Thale cress	plasma membrane	90.98	82.15
Solyc07g032490.2.1	Tomato	plasma membrane	73.32	67.14
PGSC0003DMT400075163	Potato	plasma membrane	74.66	67.07
KRH20280	Soybean	plasma membrane	74.66	66.95
KRH03705	Soybean	plasma membrane	74.09	65.98
Solyc01g096880.2.1	Tomato	plasma membrane	72.17	65.51
VIT_11s0016g05170.t01	Wine grape	plasma membrane	72.36	65.45
PGSC0003DMT400070732	Potato	plasma membrane	71.4	64.7
GSMUA_Achr6P05170_001	Banana	plasma membrane	64.88	58.38
TraesCS1D01G032700.1	Wheat	peroxisome	63.15	56.53
TraesCS1B01G038700.1	Wheat	peroxisome	62.76	56.19
TraesCS1A01G031300.1	Wheat	peroxisome	62.57	56.01
HORVU1Hr1G004720.4	Barley	plasma membrane	61.61	55.63
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	62.57	55.16
KXG32694	Sorghum	cytosol	61.8	54.86
Zm00001d009399_P001	Maize	cytosol, peroxisome, plasma membrane	61.42	54.15
GSMUA_Achr7P08300_001	Banana	plasma membrane	68.33	52.9
GSMUA_Achr4P30700_001	Banana	plasma membrane	65.83	49.93
Bra016789.1-P	Field mustard	plasma membrane	50.86	44.92
Bra026991.1-P	Field mustard	plasma membrane	50.29	44.48
Bra023868.1-P	Field mustard	plasma membrane	46.83	42.21
Bra031295.1-P	Field mustard	plasma membrane	46.64	41.61
Bra019744.1-P	Field mustard	plasma membrane	19.96	38.81
Bra028002.1-P	Field mustard	peroxisome	34.93	30.33
Bra027836.1-P	Field mustard	plasma membrane	34.74	30.02
Bra010117.1-P	Field mustard	plasma membrane	31.86	29.91
Bra013222.1-P	Field mustard	plasma membrane	28.98	29.32
Bra035429.1-P	Field mustard	plasma membrane	33.01	28.96
Bra023408.1-P	Field mustard	plastid	34.55	28.94
Bra013221.1-P	Field mustard	plasma membrane	28.41	28.68
Bra012431.1-P	Field mustard	plasma membrane	13.63	27.84
Bra011937.1-P	Field mustard	plasma membrane	27.45	27.61

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	EnsemblPlantsGene:Bra012052	EnsemblPlants:Bra012052.1	EnsemblPlants:Bra012052.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150	GO:GO:0009611
GO:GO:0009719	GO:GO:0009753	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
UniProt:M4D6E3	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF85
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0002541854	SEG:seg	:	:

Description

AT2G26690 (E=5e-231) | nitrate transporter (NTP2)

Coordinates

chrA07:-:10299324..10304696

Molecular Weight (calculated)

57387.4 Da

IEP (calculated)

9.150

GRAVY (calculated)

0.341

Length

521 amino acids

Sequence
(BLAST)

001: MESKGSWTVA DAVDYNGLPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLGTGALAVA TKLPELRPPT CHHGEACTPA TAFQMTFLYI ALYLIALGTG
101: GLKSSISGFG SDQFDDKDPK EKAQMAFFFN RFFFIISMGT LMAVTVLVYI QDEVGRSWAY GICTVSMAIA IAVFLSGTKS YRYKKSQGSP VVQIFQIIAA
201: SIRKRKTELP QSIVYLYEDT PEGLRIEHTD QFRMLDKAAV VTEGDFEQTL DGIAIPNPWK LSSVTKVEEV KMMVRLLPIW ATTIIFWTTY AQMITFSVEQ
301: ASTMRRNVGN FQIPAGSLTV FFVAAILITL AFYDRVIMPF WKKWKGKPGF SSLQLMAIGL VLSTIGMAAA AIVEQKRLSV AKSSTQKTLP ISVFLLVPQF
401: FLVGSGEAFI YTGQLDFFIT QSPKGMKTMS TGLFLTTLSL GFFVSSFLVS IVKKVTATSV NGGWLADNIN HGRLDLFYWL LVILSGINFV VYVICALWFK
501: PTKSKDSEEM EKGKGFSVED C

Best Arabidopsis Sequence Match ( AT2G26690.1 )
(BLAST)

001: MESKGSWTVA DAVDYKGRPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSTSANI VTDFMGTSFL LCLLGGFLAD SFLGRFKTIG
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC

Arabidopsis Description

NPF6.2Protein NRT1/ PTR FAMILY 6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.