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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • plasma membrane 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
EpiLoc:plasma membrane
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44319 Canola plasma membrane 78.25 97.03
CDY38629 Canola plasma membrane 78.77 96.03
Bra023868.1-P Field mustard plasma membrane 91.95 92.91
AT3G21670.1 Thale cress plasma membrane 91.61 90.68
KRH73378 Soybean cytosol, peroxisome, plasma membrane 70.03 69.56
KRH14759 Soybean plasma membrane 69.69 69.34
PGSC0003DMT400001784 Potato cytosol, peroxisome, plasma membrane 66.78 65.77
Solyc07g049290.2.1 Tomato nucleus 66.27 65.48
Solyc12g006050.1.1 Tomato cytosol, peroxisome, plasma membrane 66.1 65.2
PGSC0003DMT400010957 Potato cytosol, peroxisome, plasma membrane 65.24 64.36
VIT_12s0059g01240.t01 Wine grape plastid 70.72 63.64
GSMUA_Achr3P05990_001 Banana cytosol, plasma membrane, plastid 62.16 63.24
TraesCS5D01G419200.2 Wheat plasma membrane 63.87 62.69
HORVU2Hr1G065480.1 Barley golgi, plasma membrane 24.14 62.67
TraesCS5A01G409600.1 Wheat plasma membrane 63.53 62.46
TraesCS5B01G414000.3 Wheat plasma membrane 63.36 62.29
EES05323 Sorghum plasma membrane 63.53 62.14
Zm00001d016982_P001 Maize plasma membrane 63.01 61.74
HORVU5Hr1G099170.6 Barley plasma membrane 63.18 60.49
Os02t0580900-01 Rice plasma membrane 63.01 60.43
TraesCS2D01G327000.1 Wheat plasma membrane 57.88 59.82
TraesCS2B01G346100.1 Wheat plasma membrane 57.19 59.12
VIT_02s0087g00580.t01 Wine grape plasma membrane 29.45 58.11
TraesCS2A01G335800.1 Wheat mitochondrion 57.71 55.7
HORVU2Hr1G081050.1 Barley endoplasmic reticulum, extracellular 5.82 49.28
Bra019744.1-P Field mustard plasma membrane 22.43 48.88
Bra012052.1-P Field mustard plasma membrane 41.61 46.64
Bra026991.1-P Field mustard plasma membrane 45.89 45.5
Bra016789.1-P Field mustard plasma membrane 45.89 45.42
Bra012431.1-P Field mustard plasma membrane 17.29 39.61
Os04t0464400-00 Rice peroxisome, plasma membrane 38.18 35.79
Bra010117.1-P Field mustard plasma membrane 33.39 35.14
Bra027836.1-P Field mustard plasma membrane 35.96 34.83
Bra035429.1-P Field mustard plasma membrane 35.27 34.68
Bra028002.1-P Field mustard peroxisome 35.45 34.5
Bra011937.1-P Field mustard plasma membrane 29.79 33.59
Bra013222.1-P Field mustard plasma membrane 29.45 33.4
Bra013221.1-P Field mustard plasma membrane 29.45 33.33
Bra023408.1-P Field mustard plastid 33.73 31.67
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EnsemblPlantsGene:Bra031295EnsemblPlants:Bra031295.1EnsemblPlants:Bra031295.1-PGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085InterPro:IPR020846UniProt:M4ER72InterPro:MFS_domInterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF154SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0002547720SEG:seg::::
Description
AT3G21670 (E=2e-251) | nitrate transporter (NTP3)
Coordinates
chrA05:+:16256475..16258522
Molecular Weight (calculated)
64625.1 Da
IEP (calculated)
9.128
GRAVY (calculated)
0.270
Length
584 amino acids
Sequence
(BLAST)
001: MVHVSSHGAK DGSEEAFDYR GNPPDKSKIG GWLGAGLILG SELSERICVM GISMNLVTYL VGDLHISSAK SATIVTNFMG TLNLLGLLGG FLADAKLGRY
101: KMVAISASVT ALGVLLLTVA TTIPSMRPPL CDDFRRLHHQ CVEANGHQLA LLYVALYTIA LGGGGIKSNV SGFGSDQFDT SDPKEEKQMI FFFNRFYFSI
201: SLGSLFAVIV LVYVQDNVGR GWGYGISAAT MVVAAVVLLC GTKLYRFKKP KGSPFTVIWR VCFLAWKKRN ESYPSHQSLL NGYETTTVPH TERLKCLDKA
301: AVVVEESSPS TKEFKEKDPW MVSTVTQVEE VKLVVKLIPI WATNILFWTI YSQMTTFTVE QATFMERKLG SFTVPAGSYS AFLILTILLF TSLNERVSVP
401: LARMVTKKPQ GITSLQRIGV GLVLSMGAMA VAAVIENARR EAEVTNCYKI SAFWLIPQYF LVGAGEAFAY VGQLEFFIRE APERMKSMST GLFLSTISMG
501: FFVSSLLVSL VDKVTHKSWL RSNLNKARLN YFYWLLVVLG AFNFLVFIVF AMKHQYKADM ISVGVDDSVE KEKEKSELEL KDIP
Best Arabidopsis Sequence Match ( AT3G21670.1 )
(BLAST)
001: MVHVSSSHGA KDGSEEAYDY RGNPPDKSKT GGWLGAGLIL GSELSERICV MGISMNLVTY LVGDLHISSA KSATIVTNFM GTLNLLGLLG GFLADAKLGR
101: YKMVAISASV TALGVLLLTV ATTISSMRPP ICDDFRRLHH QCIEANGHQL ALLYVALYTI ALGGGGIKSN VSGFGSDQFD TSDPKEEKQM IFFFNRFYFS
201: ISVGSLFAVI ALVYVQDNVG RGWGYGISAA TMVVAAIVLL CGTKRYRFKK PKGSPFTTIW RVGFLAWKKR KESYPAHPSL LNGYDNTTVP HTEMLKCLDK
301: AAISKNESSP SSKDFEEKDP WIVSTVTQVE EVKLVMKLVP IWATNILFWT IYSQMTTFTV EQATFMDRKL GSFTVPAGSY SAFLILTILL FTSLNERVFV
401: PLTRRLTKKP QGITSLQRIG VGLVFSMAAM AVAAVIENAR REAAVNNDKK ISAFWLVPQY FLVGAGEAFA YVGQLEFFIR EAPERMKSMS TGLFLSTISM
501: GFFVSSLLVS LVDRVTDKSW LRSNLNKARL NYFYWLLVVL GALNFLIFIV FAMKHQYKAD VITVVVTDDD SVEKEVTKKE SSEFELKDIP
Arabidopsis Description
NPF6.4Protein NRT1/ PTR FAMILY 6.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVE0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.