Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G081050.1 | Barley | endoplasmic reticulum, extracellular | 11.86 | 97.1 |
| TraesCS2B01G346100.1 | Wheat | plasma membrane | 96.99 | 96.99 |
| TraesCS2A01G335800.1 | Wheat | mitochondrion | 96.64 | 90.25 |
| TraesCS5D01G419200.2 | Wheat | plasma membrane | 72.74 | 69.08 |
| GSMUA_Achr3P05990_001 | Banana | cytosol, plasma membrane, plastid | 64.07 | 63.07 |
| KRH14759 | Soybean | plasma membrane | 63.01 | 60.65 |
| KRH73378 | Soybean | cytosol, peroxisome, plasma membrane | 63.01 | 60.54 |
| Solyc12g006050.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 62.65 | 59.8 |
| PGSC0003DMT400010957 | Potato | cytosol, peroxisome, plasma membrane | 62.3 | 59.46 |
| Solyc07g049290.2.1 | Tomato | nucleus | 61.95 | 59.22 |
| PGSC0003DMT400001784 | Potato | cytosol, peroxisome, plasma membrane | 62.12 | 59.19 |
| Bra023868.1-P | Field mustard | plasma membrane | 59.82 | 58.48 |
| Bra031295.1-P | Field mustard | plasma membrane | 59.82 | 57.88 |
| AT3G21670.1 | Thale cress | plasma membrane | 59.29 | 56.78 |
| CDY44319 | Canola | plasma membrane | 46.55 | 55.84 |
| CDY38629 | Canola | plasma membrane | 46.55 | 54.91 |
| VIT_12s0059g01240.t01 | Wine grape | plastid | 62.12 | 54.08 |
| VIT_02s0087g00580.t01 | Wine grape | plasma membrane | 27.79 | 53.04 |
| TraesCS4D01G361500.1 | Wheat | peroxisome | 50.97 | 47.52 |
| TraesCS7D01G297000.1 | Wheat | plasma membrane | 50.62 | 47.43 |
| TraesCS1D01G214200.1 | Wheat | plasma membrane | 49.73 | 47.15 |
| TraesCS1D01G032700.1 | Wheat | peroxisome | 48.32 | 46.91 |
| TraesCS1D01G214300.1 | Wheat | plasma membrane | 49.38 | 46.89 |
| Os04t0464400-00 | Rice | peroxisome, plasma membrane | 48.32 | 43.82 |
| TraesCS2D01G307400.1 | Wheat | plasma membrane | 35.58 | 34.54 |
| TraesCS7D01G357300.2 | Wheat | plasma membrane | 36.81 | 33.66 |
| TraesCS2D01G348500.1 | Wheat | plasma membrane | 32.57 | 32.92 |
| TraesCS4D01G087900.1 | Wheat | golgi, peroxisome, plasma membrane | 35.04 | 32.73 |
| TraesCS5D01G398000.1 | Wheat | plasma membrane | 33.45 | 32.53 |
| TraesCS2D01G348600.1 | Wheat | plasma membrane | 32.04 | 32.38 |
| TraesCS3D01G081100.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 37.17 | 32.11 |
| TraesCS5D01G067100.1 | Wheat | plasma membrane | 31.86 | 32.09 |
| TraesCS2D01G259400.2 | Wheat | plasma membrane | 32.57 | 31.78 |
| TraesCS5D01G067400.1 | Wheat | plasma membrane | 30.97 | 31.19 |
| TraesCS2D01G348400.1 | Wheat | plasma membrane | 26.02 | 26.73 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G327000.1 | EnsemblPlantsGene:TraesCS2D01G327000 | Gene3D:1.20.1250.20 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0022857 | GO:GO:0055085 | InterPro:MFS_trans_sf |
| InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF154 | PFAM:PF00854 | SEG:seg | SUPFAM:SSF103473 |
| TMHMM:TMhelix | MapMan:24.2.2.9 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:420309737..420312836
Molecular Weight (calculated)
60504.9 Da
IEP (calculated)
9.544
GRAVY (calculated)
0.366
Length
565 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSTGGFDDN GGCEGLVVDF KGRPVDKSRV GGWFGAGLIL VTELAERVCV MGISMNLVTY LTGDMHLSSA KSANIVTNFM GTLNLLALLG GFIADAKFGR
101: YRTIAVSATI TAVGVSLLAA STAVPGMRPP RCAAAAGGEA RSRAAGCVPA SGGQLGMLYA ALYTIAAGGG GLKANVSGFG TDQFDGRDPR EERAMLYFFN
201: RFYFCISLGS LFAVTVLVYV QDNLGRAWGY GVAAAAMAAA VAVFAAGAPR YRYHRPQGSP LAVIGRVLWG AWRNRRMPCP ADASELHGFR EAKVPHTDRL
301: RCLDKAAIAE ADLATAVTVT EVEEVKMVVK LLPMWSTCIL FWTIYSQMTT FSIQQAEQMD RRAGGRFVVP AGSLSVFLFL SVLLFTALNE RLLVPLAARL
401: TRRPQGLTSL QRVAAGLVLA TLGMAVSALV EKKRRDASDG SGGDAVSALW LVPQFFLVGA GEAFAYVGQL EFFIREAPER MKSMSTGLFL ATLAMGFFLS
501: SLLVLGVDAV TRGAWIRGHL DDGRLDLFYW MLAVLGLANF AVFLVFASRH QYKRTRPDAA TAELP
101: YRTIAVSATI TAVGVSLLAA STAVPGMRPP RCAAAAGGEA RSRAAGCVPA SGGQLGMLYA ALYTIAAGGG GLKANVSGFG TDQFDGRDPR EERAMLYFFN
201: RFYFCISLGS LFAVTVLVYV QDNLGRAWGY GVAAAAMAAA VAVFAAGAPR YRYHRPQGSP LAVIGRVLWG AWRNRRMPCP ADASELHGFR EAKVPHTDRL
301: RCLDKAAIAE ADLATAVTVT EVEEVKMVVK LLPMWSTCIL FWTIYSQMTT FSIQQAEQMD RRAGGRFVVP AGSLSVFLFL SVLLFTALNE RLLVPLAARL
401: TRRPQGLTSL QRVAAGLVLA TLGMAVSALV EKKRRDASDG SGGDAVSALW LVPQFFLVGA GEAFAYVGQL EFFIREAPER MKSMSTGLFL ATLAMGFFLS
501: SLLVLGVDAV TRGAWIRGHL DDGRLDLFYW MLAVLGLANF AVFLVFASRH QYKRTRPDAA TAELP
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.