Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, peroxisome, plasma membrane
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G090800.1 Wheat golgi, peroxisome, plasma membrane 98.02 98.18
TraesCS4A01G225400.1 Wheat golgi, peroxisome, plasma membrane, plastid 98.02 97.85
HORVU4Hr1G015640.2 Barley golgi, peroxisome, plasma membrane 95.21 95.52
OQU83190 Sorghum plasma membrane 78.02 83.39
Os11t0235200-01 Rice plasma membrane 83.47 80.67
Zm00001d007255_P001 Maize plasma membrane 79.83 77.53
GSMUA_Achr10P... Banana plasma membrane 68.1 73.05
GSMUA_Achr6P07370_001 Banana plasma membrane 65.79 71.07
GSMUA_Achr5P16920_001 Banana plasma membrane 64.79 70.38
TraesCS2D01G307400.1 Wheat plasma membrane 66.61 69.24
GSMUA_Achr9P08330_001 Banana plasma membrane 66.61 69.01
GSMUA_Achr6P29080_001 Banana plasma membrane 66.78 68.47
GSMUA_AchrUn_... Banana plasma membrane 20.66 67.57
Solyc11g042820.1.1 Tomato peroxisome, plasma membrane, vacuole 63.97 65.26
CDX93764 Canola plasma membrane 64.63 65.17
Bra028002.1-P Field mustard peroxisome 64.46 65.0
CDY50182 Canola plasma membrane 62.81 64.63
AT1G33440.1 Thale cress plasma membrane 64.13 64.56
GSMUA_Achr8P29280_001 Banana plasma membrane 64.79 61.54
PGSC0003DMT400082762 Potato plasma membrane 45.95 61.5
VIT_18s0089g01010.t01 Wine grape plasma membrane 67.44 45.08
TraesCS2D01G348500.1 Wheat plasma membrane 33.39 36.14
TraesCS5D01G419200.2 Wheat plasma membrane 35.37 35.97
TraesCS7D01G357300.2 Wheat plasma membrane 36.2 35.44
TraesCS2D01G259400.2 Wheat plasma membrane 33.88 35.41
TraesCS2D01G327000.1 Wheat plasma membrane 32.73 35.04
TraesCS4D01G361500.1 Wheat peroxisome 35.04 34.98
TraesCS5D01G067400.1 Wheat plasma membrane 32.23 34.76
TraesCS2D01G348600.1 Wheat plasma membrane 32.07 34.7
TraesCS1D01G214300.1 Wheat plasma membrane 34.05 34.62
TraesCS5D01G067100.1 Wheat plasma membrane 32.07 34.58
TraesCS7D01G297000.1 Wheat plasma membrane 34.38 34.49
TraesCS1D01G032700.1 Wheat peroxisome 32.89 34.19
TraesCS1D01G214200.1 Wheat plasma membrane 33.39 33.89
TraesCS5D01G398000.1 Wheat plasma membrane 31.9 33.22
TraesCS2D01G348400.1 Wheat plasma membrane 26.12 28.73
TraesCS3D01G081100.1 Wheat cytosol, peroxisome, plasma membrane, plastid 30.25 27.98
Protein Annotations
EnsemblPlants:TraesCS4D01G087900.1EnsemblPlantsGene:TraesCS4D01G087900GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0022857GO:GO:0055085
InterPro:MFS_trans_sfInterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF198PFAM:PF00854SEG:seg
SUPFAM:SSF103473TMHMM:TMhelixMapMan:24.2.2.9:::
Description
No Description!
Coordinates
chr4D:-:63043542..63047560
Molecular Weight (calculated)
65246.1 Da
IEP (calculated)
8.108
GRAVY (calculated)
0.365
Length
605 amino acids
Sequence
(BLAST)
001: MDVESSRQQG PKGDANSNSM AAASEVSVDW RGRPCRPQRH GGMKAAVFVL GIQAFEIMAI AAVGNNLITY VFNEMHFPLS KSANIVTNFI GTMFLLSLLG
101: GFLSDSYLGS FWTMLIFGFV ELSGFILLAV QAHLPQLRPP ACDMKAAGQC EEVAGVKAGI FFAALYLVAL GSGCLKPNII AHGADQFRRD GEDQAVDGGK
201: RLSSYFNAAY FSFCVGEMVA LTVLVWVQTR SGMDVGFGVS AAAMAVGLVS LVAGVVFYRN KPPQGSICTP IAKVFVAAVA ERKQVCPSSR ATLQGISSTG
301: AHEMRLNTTN ICRINKFRFL DKACVKAQDG GSKESGWGLC TAAEVEQVKV LLCVVPIFAC TIVFNTILAQ LQTFSVQQGS AMDTRLAANF HAPPASLQAI
401: PYIMLIVLVP AYEAVFVPAV RRLTGVGTGI TPLQRIGVGL FAVTFSMVAA ALVEARRRHS SVSGDGRTLS IFWIAPQFLV FGLSEMFTAV GLIEFFYKQS
501: LSGMQAFLTS MTYCSYSFGF YLSSVLVSLV NRVTSRNGGN GWLSNNDLDK DRLDLFYWLL AALSILNFFN FLFWSRWYSN SVETVQVAGV GGDGGSEQED
601: EKGSA
Best Arabidopsis Sequence Match ( AT1G59740.1 )
(BLAST)
001: MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I
Arabidopsis Description
NPF4.3Protein NRT1/ PTR FAMILY 4.3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.