Factsheet for TraesCS2D01G348600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G368700.1	Wheat	plasma membrane	95.89	95.89
TraesCS2A01G350300.1	Wheat	plasma membrane	88.19	92.84
TraesCS2D01G348500.1	Wheat	plasma membrane	78.89	78.89
Zm00001d003208_P001	Maize	plasma membrane	63.33	77.12
TraesCS5D01G067400.1	Wheat	plasma membrane	77.1	76.83
OQU81851	Sorghum	plasma membrane	77.1	76.55
TraesCS5D01G067100.1	Wheat	plasma membrane	76.74	76.47
Os04t0491500-02	Rice	plasma membrane	74.96	75.22
KXG26617	Sorghum	plasma membrane	79.07	75.04
HORVU2Hr1G007730.1	Barley	mitochondrion	44.9	71.31
TraesCS5D01G398000.1	Wheat	plasma membrane	51.88	49.91
TraesCS2D01G259400.2	Wheat	plasma membrane	49.73	48.01
TraesCS2D01G348400.1	Wheat	plasma membrane	37.92	38.55
Os04t0491200-00	Rice	plasma membrane, vacuole	43.47	37.1
KRH51937	Soybean	plasma membrane	37.03	36.19
Solyc04g079510.1.1	Tomato	plasma membrane	35.96	35.2
PGSC0003DMT400030533	Potato	plasma membrane	36.31	34.88
Solyc04g079520.2.1	Tomato	plasma membrane	36.14	34.71
KRG96656	Soybean	plasma membrane	35.42	34.38
PGSC0003DMT400030534	Potato	plasma membrane	35.96	34.36
KRH02511	Soybean	plasma membrane	36.49	34.34
TraesCS7D01G357300.2	Wheat	plasma membrane	37.92	34.3
KRH19434	Soybean	plasma membrane	35.96	34.07
Solyc10g039290.1.1	Tomato	plasma membrane	34.7	33.92
PGSC0003DMT400030530	Potato	mitochondrion	21.29	33.9
Solyc04g079530.2.1	Tomato	plasma membrane	35.06	33.85
KRH68384	Soybean	plasma membrane	35.06	33.68
TraesCS2D01G307400.1	Wheat	plasma membrane	35.06	33.68
KRH33721	Soybean	plasma membrane	36.31	33.61
KRH61236	Soybean	plasma membrane	36.67	33.5
KRG90426	Soybean	plasma membrane	35.6	33.11
PGSC0003DMT400011063	Potato	cytosol	34.53	33.1
VIT_14s0060g00220.t01	Wine grape	plasma membrane	35.96	32.52
Solyc01g102360.1.1	Tomato	plasma membrane	35.42	32.51
PGSC0003DMT400046950	Potato	plasma membrane	35.06	32.08
TraesCS4D01G087900.1	Wheat	golgi, peroxisome, plasma membrane	34.7	32.07
TraesCS2D01G327000.1	Wheat	plasma membrane	32.38	32.04
PGSC0003DMT400054593	Potato	plasma membrane	35.06	31.92
VIT_18s0001g11280.t01	Wine grape	plastid	35.24	30.97
TraesCS7D01G297000.1	Wheat	plasma membrane	33.09	30.68
TraesCS4D01G361500.1	Wheat	peroxisome	32.74	30.2
TraesCS1D01G214200.1	Wheat	plasma membrane	32.02	30.03
TraesCS5D01G419200.2	Wheat	plasma membrane	31.84	29.92
TraesCS1D01G214300.1	Wheat	plasma membrane	31.84	29.92
TraesCS1D01G032700.1	Wheat	peroxisome	30.23	29.04
GSMUA_Achr11P...	Banana	plasma membrane	32.38	27.38
TraesCS3D01G081100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	32.02	27.37
Os04t0491350-00	Rice	plasma membrane	0.72	0.86

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF104
SUPFAM:SSF103473	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G348600	EnsemblPlants:TraesCS2D01G348600.1	TIGR:cd06174	SEG:seg

Description

No Description!

Coordinates

chr2D:+:446600007..446605225

Molecular Weight (calculated)

61569.4 Da

IEP (calculated)

8.585

GRAVY (calculated)

0.364

Length

559 amino acids

Sequence
(BLAST)

001: MTIGGSVDWK GNPIDREVHG GVRAAWFMYV ANVVMNMVIV PNLLNLVTYL HGTMHMGVSS SATTVTNLVG ATCGFALIGA FLSDSYIMRS RTILIFGPLM
101: FLGYGLLALQ AYRPSLHPAP CNTEADLSSC KEVHGRNATL LYAALYISAF GDGCIRTCIP SLGADQFDRK DPSESRQQSS FFNWYTFGVS LGGFIGLILI
201: VWLQNYKGWD VGLGACAILV LFGLLVVAVG LPFYRNQVPE GSPLTRILQV LVVALRNRNL ELSEKLEEAE DSRTGTGTGF VQVPPQRKSL KFLDKACIHH
301: GKDGDWSVCN ATKVEETKIV LRVLPLFFSS MIAYVSNTIV FTFTVQQGGM TNTSLGKIHV SPATLFIIPI TFQLIMLAVY DQFIVPFLRK RTGYVGGIAH
401: LQRIAIGFAS MILAAVIAAV VEKKRKEAVV QMSLFWLAPQ FFLLGVADVT SFTGLLEFFN SEAPRGMKSI ATALFWCELG LASLMATFLV EIVNRATRHG
501: QQGGWLEGKS LNNSRLDLFY WVVAVVGLLG FLNYLYWAKK YVYQHNPRIA EPSVDEDSP

Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)

001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS

Arabidopsis Description

NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.