Factsheet for TraesCS2A01G350300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G368700.1	Wheat	plasma membrane	93.79	89.09
TraesCS2D01G348600.1	Wheat	plasma membrane	92.84	88.19
TraesCS5A01G056100.1	Wheat	plasma membrane	68.74	76.84
TraesCS2A01G350100.1	Wheat	plasma membrane	76.84	72.99
TraesCS5A01G056200.2	Wheat	plasma membrane	75.33	71.17
OQU81851	Sorghum	plasma membrane	74.76	70.52
Zm00001d003208_P001	Maize	plasma membrane	60.64	70.15
Os04t0491500-02	Rice	plasma membrane	73.45	70.02
KXG26617	Sorghum	plasma membrane	76.46	68.93
HORVU2Hr1G007730.1	Barley	mitochondrion	41.24	62.22
TraesCS5A01G388000.1	Wheat	plasma membrane	51.22	46.74
TraesCS2A01G264500.1	Wheat	plasma membrane	49.53	45.42
TraesCS2A01G350000.1	Wheat	plasma membrane	38.61	37.89
Os04t0491200-00	Rice	plasma membrane, vacuole	45.57	36.95
KRH51937	Soybean	plasma membrane	38.04	35.31
TraesCS7A01G365100.1	Wheat	plasma membrane	38.79	35.09
PGSC0003DMT400030533	Potato	plasma membrane	36.53	33.33
Solyc04g079510.1.1	Tomato	plasma membrane	35.78	33.27
Solyc04g079520.2.1	Tomato	plasma membrane	36.35	33.16
KRH19434	Soybean	plasma membrane	36.53	32.88
TraesCS3A01G272600.1	Wheat	plasma membrane	32.96	32.83
KRH02511	Soybean	plasma membrane	36.72	32.83
KRH61236	Soybean	plasma membrane	37.66	32.68
KRG96656	Soybean	plasma membrane	35.4	32.64
TraesCS2A01G309100.1	Wheat	plasma membrane	35.59	32.59
Solyc10g039290.1.1	Tomato	plasma membrane	34.84	32.34
KRH33721	Soybean	plasma membrane	36.72	32.28
PGSC0003DMT400030534	Potato	plasma membrane	35.4	32.14
KRH68384	Soybean	plasma membrane	35.03	31.96
Solyc04g079530.2.1	Tomato	plasma membrane	34.84	31.95
KRG90426	Soybean	plasma membrane	35.97	31.78
PGSC0003DMT400011063	Potato	cytosol	34.65	31.56
TraesCS4A01G225400.1	Wheat	golgi, peroxisome, plasma membrane, plastid	35.97	31.52
VIT_14s0060g00220.t01	Wine grape	plasma membrane	36.16	31.07
PGSC0003DMT400030530	Potato	mitochondrion	20.53	31.05
Solyc01g102360.1.1	Tomato	plasma membrane	35.4	30.87
PGSC0003DMT400046950	Potato	plasma membrane	35.03	30.44
VIT_18s0001g11280.t01	Wine grape	plastid	36.16	30.19
TraesCS7A01G301700.1	Wheat	plasma membrane	34.27	30.18
PGSC0003DMT400054593	Potato	plasma membrane	34.84	30.13
TraesCS5A01G537100.1	Wheat	peroxisome	33.33	29.06
TraesCS1A01G211000.1	Wheat	cytosol	32.2	28.74
TraesCS1A01G210900.1	Wheat	plasma membrane	25.99	28.57
TraesCS5A01G409600.1	Wheat	plasma membrane	31.83	28.45
TraesCS1A01G031300.1	Wheat	peroxisome	30.51	27.84
TraesCS2A01G335800.1	Wheat	mitochondrion	31.26	27.44
TraesCS3A01G081100.3	Wheat	cytosol, peroxisome, plasma membrane, plastid	30.89	26.07
GSMUA_Achr11P...	Banana	plasma membrane	31.83	25.57
Os04t0491350-00	Rice	plasma membrane	0.75	0.86

Protein Annotations

EnsemblPlants:TraesCS2A01G350300.1	EnsemblPlantsGene:TraesCS2A01G350300	Gene3D:1.20.1250.20	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF104	PFAM:PF00854
SEG:seg	SUPFAM:SSF103473	TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.9	:

Description

No Description!

Coordinates

chr2A:+:590636771..590639747

Molecular Weight (calculated)

57980.2 Da

IEP (calculated)

8.593

GRAVY (calculated)

0.456

Length

531 amino acids

Sequence
(BLAST)

001: MTIGGSVDWR GNPIDREVHG GVRAAWFMYV ANVVMNMVIV PNLLNLVTYL HGTMHMGVSG SATTVTNLVG ATCGFALVGA FLSDSYIMRS RTILIFGPLM
101: FLGYGLLTLQ AYLPSLHPAP CNMEADLSSC KEVHGWNATL LYAALYISAF GDGCIRTCVP SLGADQFDRK DLSESRQQSS FFNWYTFGIS LGGFIGLILI
201: VWLQNYKGWD VGLGACAILV LFGLLVVAAG LPFYRNQVPE GSPLTRIVQV LVVASRNRKL ELPEKLEEAE DSRTGTGTGF VQVPPQRKSL KFLDKACIHH
301: GKNGDWSVCS ATKVEETKIV LRVLPLFFSS TIAYVSNVIV FTFTVQQGGM TNTSLGKIHV SPATLFIIPI TFQLIMLTVY DQFIVSFLRK RTGYVGGITH
401: LQRIAIGFAA MILAAVIAAV VERKRKEAVV QMSLFWLAPQ FFLLGVADVT SFTGLLEFFN SEAPRGMKSI ATALFWCELG LASLMATFLV EIVNRATRHG
501: QQGGWLEGKS LNNSVLTCST GLWLLSGCLV S

Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)

001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS

Arabidopsis Description

NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.