Factsheet for TraesCS3A01G272600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
golgi 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G071510.1	Barley	golgi, plasma membrane	91.74	85.64
HORVU2Hr1G098210.2	Barley	mitochondrion, plasma membrane	45.4	78.83
Zm00001d043463_P001	Maize	plasma membrane	74.3	72.39
OQU87541	Sorghum	cytosol, peroxisome, plasma membrane	72.61	63.13
KRH11088	Soybean	plasma membrane	55.91	49.75
KRH21158	Soybean	plasma membrane	55.35	49.58
KRH42929	Soybean	plasma membrane	55.53	49.09
KRH59041	Soybean	plasma membrane	54.6	48.99
Solyc03g005950.1.1	Tomato	plasma membrane	55.35	47.05
PGSC0003DMT400071504	Potato	plasma membrane	51.97	46.4
TraesCS7A01G365100.1	Wheat	plasma membrane	39.21	35.6
TraesCS5A01G388000.1	Wheat	plasma membrane	37.9	34.71
TraesCS2A01G309100.1	Wheat	plasma membrane	37.71	34.66
TraesCS5A01G056200.2	Wheat	plasma membrane	36.21	34.34
TraesCS5A01G056100.1	Wheat	plasma membrane	30.58	34.32
TraesCS1A01G210900.1	Wheat	plasma membrane	30.96	34.16
TraesCS2A01G350300.1	Wheat	plasma membrane	32.83	32.96
TraesCS2A01G350100.1	Wheat	plasma membrane	34.52	32.92
TraesCS2A01G264500.1	Wheat	plasma membrane	35.46	32.64
TraesCS4A01G225400.1	Wheat	golgi, peroxisome, plasma membrane, plastid	36.59	32.18
TraesCS7A01G301700.1	Wheat	plasma membrane	36.21	32.01
TraesCS1A01G211000.1	Wheat	cytosol	34.52	30.92
TraesCS1A01G031300.1	Wheat	peroxisome	33.02	30.24
TraesCS5A01G537100.1	Wheat	peroxisome	34.52	30.21
TraesCS2A01G335800.1	Wheat	mitochondrion	33.4	29.42
TraesCS2A01G350000.1	Wheat	plasma membrane	29.08	28.65
TraesCS5A01G409600.1	Wheat	plasma membrane	31.33	28.11
TraesCS3A01G081100.3	Wheat	cytosol, peroxisome, plasma membrane, plastid	32.65	27.66

Protein Annotations

EnsemblPlants:TraesCS3A01G272600.1	EnsemblPlantsGene:TraesCS3A01G272600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF131	PFAM:PF00854	SEG:seg
SUPFAM:SSF103473	TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.9	:	:

Description

No Description!

Coordinates

chr3A:+:501894239..501897356

Molecular Weight (calculated)

59528.1 Da

IEP (calculated)

8.366

GRAVY (calculated)

0.337

Length

533 amino acids

Sequence
(BLAST)

001: MYFMLVMHIN LADASNLLTD YMGTSYMIAV LITVFADTFV GRYQTVIISS LVELIGLLLM TLQAHSPKLL PEGCKWPEPT CQRVGGHSET RLYVGLYLVA
101: IGSAGIKAAL PAHCADQFEA KHPRERRQMS SFFNWLLLSL CIGGAVSVTV FVWIQNVKGW DKGFGAATGV MGLALIAFLA GMPRYRIFTA QGSSALLDIL
201: RVYVAAIRNR NLQLPENPDE LYEISRSKAS PEEEFVSHRD RPFRFLDRAA IVQAPAAEAP SPWRQCRVTH VEHAKTVLAM VPIFCSAIIM GTCLAQFQTF
301: SIQQGSTMNT WVGDFQMQPA TLPIIPLTML IFAVPIYERL FVPFARGITG HPNGIPYLQR VGVGLVLSVV SMCIAAVVEM HRKKVAVRHG MLDAFPMLQP
401: LPMSVFWLAP QYGVFGIADM FTYIGLLEFF YSQAPPALKS MSSAFLWASM SLGYYFSTII VKAVNAATRK HTLSGGWLNG NNINRNHLDL FFWLLAVLSF
501: INFLNYLYWA SWYKYVKPQD EEDDAVAPVE QQV

Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)

001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS

Arabidopsis Description

NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.