Factsheet for TraesCS3A01G081100.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane, plastid
Any Predictor:	cytosol, peroxisome, plasma membrane, plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G095900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	93.48	90.46
TraesCS3D01G081100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	93.96	90.37
HORVU3Hr1G014510.3	Barley	plastid	93.0	89.72
EES00465	Sorghum	plastid	79.33	74.81
Zm00001d040201_P001	Maize	plasma membrane	77.42	73.68
Os01t0103100-01	Rice	plasma membrane	69.16	71.78
EES19057	Sorghum	plastid	27.82	70.0
VIT_01s0150g00250.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.57	66.41
CDX85654	Canola	cytosol, plasma membrane, plastid	65.66	66.4
CDX91126	Canola	plastid	65.66	66.4
Bra023408.1-P	Field mustard	plastid	65.5	66.24
KRH01794	Soybean	cytosol, peroxisome, plasma membrane	66.14	65.93
AT5G13400.1	Thale cress	plasma membrane	65.02	65.54
GSMUA_Achr9P01100_001	Banana	cytosol, peroxisome, plasma membrane	60.1	63.53
PGSC0003DMT400072037	Potato	cytosol, peroxisome, plasma membrane	65.34	62.94
TraesCS1A01G211000.1	Wheat	cytosol	33.39	35.29
TraesCS1A01G031300.1	Wheat	peroxisome	31.8	34.36
TraesCS5A01G537100.1	Wheat	peroxisome	33.23	34.32
TraesCS5A01G409600.1	Wheat	plasma membrane	32.11	34.01
TraesCS2A01G335800.1	Wheat	mitochondrion	32.43	33.72
TraesCS7A01G301700.1	Wheat	plasma membrane	31.48	32.84
TraesCS1A01G210900.1	Wheat	plasma membrane	25.12	32.71
TraesCS3A01G272600.1	Wheat	plasma membrane	27.66	32.65
TraesCS5A01G056100.1	Wheat	plasma membrane	23.85	31.58
TraesCS2A01G264500.1	Wheat	plasma membrane	28.78	31.26
TraesCS5A01G388000.1	Wheat	plasma membrane	28.62	30.93
TraesCS2A01G350300.1	Wheat	plasma membrane	26.07	30.89
TraesCS2A01G309100.1	Wheat	plasma membrane	28.46	30.86
TraesCS7A01G365100.1	Wheat	plasma membrane	28.78	30.83
TraesCS5A01G056200.2	Wheat	plasma membrane	27.34	30.61
TraesCS2A01G350100.1	Wheat	plasma membrane	27.19	30.59
TraesCS4A01G225400.1	Wheat	golgi, peroxisome, plasma membrane, plastid	27.66	28.71
TraesCS2A01G350000.1	Wheat	plasma membrane	23.05	26.8

Protein Annotations

EnsemblPlants:TraesCS3A01G081100.3	EnsemblPlantsGene:TraesCS3A01G081100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006857	GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:MFS_trans_sf
InterPro:POT_fam	InterPro:PTR2_symporter_CS	PANTHER:PTHR11654	PANTHER:PTHR11654:SF112	PFAM:PF00854	ScanProsite:PS01022
SEG:seg	SUPFAM:SSF103473	TMHMM:TMhelix	MapMan:24.2.2.9	:	:

Description

No Description!

Coordinates

chr3A:+:52457512..52459482

Molecular Weight (calculated)

68469.8 Da

IEP (calculated)

8.480

GRAVY (calculated)

0.218

Length

629 amino acids

Sequence
(BLAST)

001: MEEPTHTPPR NKAKKEIKSP PPPPLTMSSL SLQRKKLGSH FLESDERRRF YGASAAIGTT PLDIRGAPIP ERDLARTGGW VAAFFIFGNE TAERMAYYGL
101: SVNMVVFMFK VMHLPFAASA NAVNNFLGIS QASSVLGGFL ADAYLGRYWT IAAFTTLYLL GLIALTLCAT LPALAPAQDG CDKLAMLLGG CAPAQRWQMA
201: YLYTALYVTA FGAAGIRPCV SSFGADQFDD RSAGYKRRLD RFFNLFYLAV TVGAIAAFTL VVYIQMHRGW AAAFGALALA MGASNALFFA GTPLYRHKAP
301: GGSPLTRVAQ VLVAAFRKRN ADFGDGSYVG LYEVAGAKSA IRGSGKIEHT DDFRWLDKAA LRLDDDGEEE EEQEEDPWRL CTVTQVEEVK ILAYTLNTGL
401: LAGAVRLPVT CMPVFPCLAI FLVLALYYQT FAPLARRITG HPHGASQLQR VGLGLVFSIL SVAWAGAFER YRRRYAVEHG YLGLFLTPMP GLSAYWLLIQ
501: YCLIGVAEVF CLVGLIEFLY QEAPDAMRSV GSAYAAVAGG MGCFMATALN NAVDAATGDP VNGRPSWLAQ NINVGRFDYL YWLLAVLSTL NFAVFLYFAS
601: IYKYRTPPPT TAGTNGSSKG EVSVVSDHK

Best Arabidopsis Sequence Match ( AT5G13400.1 )
(BLAST)

001: MVASEIKSPV SVPETPGSSS VHHRKQLSVF FIESDNRRLA LGRGYTGGTT PVNIHGKPIA NLSKTGGWIA AFFIFGNEMA ERMAYFGLSV NMVAFMFYVM
101: HRPFESSSNA VNNFLGISQA SSVLGGFLAD AYLGRYWTIA IFTTMYLVGL IGITLGASLK MFVPDQSNCG QLSLLLGNCE EAKSWQMLYL YTVLYITGFG
201: AAGIRPCVSS FGADQFDEKS KDYKTHLDRF FNFFYLSVTL GAIIAFTLVV YVQMELGWGM AFGTLAVAMG ISNALFFAGT PLYRHRLPGG SPLTRVAQVL
301: VAAFRKRNAA FTSSEFIGLY EVPGLKSAIN GSRKIPHSND FIWLDKAALE LKEDGLEPSP WKLCTVTQVE EVKILIRLIP IPTCTIMLSL VLTEYLTLSV
401: QQAYTLNTHI QHLKLPVTCM PVFPGLSIFL ILSLYYSVFV PITRRITGNP HGASQLQRVG IGLAVSIISV AWAGLFENYR RHYAIQNGFE FNFLTQMPDL
501: TAYWLLIQYC LIGIAEVFCI VGLLEFLYEE APDAMKSIGS AYAALAGGLG CFAATILNNI VKAATRDSDG KSWLSQNINT GRFDCLYWLL TLLSFLNFCV
601: FLWSAHRYKY RAIESEEDKS SAVL

Arabidopsis Description

NPF6.1Protein NRT1/ PTR FAMILY 6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYR6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.