Factsheet for Os01t0103100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 2
cytosol 1
vacuole 2
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

vacuole: 18557835
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G095900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	75.08	70.0
HORVU3Hr1G014510.3	Barley	plastid	75.25	69.94
TraesCS3D01G081100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	75.25	69.72
TraesCS3A01G081100.3	Wheat	cytosol, peroxisome, plasma membrane, plastid	71.78	69.16
Zm00001d040201_P001	Maize	plasma membrane	73.93	67.78
EES00465	Sorghum	plastid	74.09	67.32
KRH01794	Soybean	cytosol, peroxisome, plasma membrane	65.51	62.92
CDX91126	Canola	plastid	64.52	62.86
Bra023408.1-P	Field mustard	plastid	64.36	62.7
CDX85654	Canola	cytosol, plasma membrane, plastid	64.36	62.7
GSMUA_Achr9P01100_001	Banana	cytosol, peroxisome, plasma membrane	60.89	62.02
VIT_01s0150g00250.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.85	61.41
AT5G13400.1	Thale cress	plasma membrane	62.71	60.9
PGSC0003DMT400072037	Potato	cytosol, peroxisome, plasma membrane	63.7	59.11
EES19057	Sorghum	plastid	21.62	52.4
Os10t0554200-02	Rice	plasma membrane	35.31	35.91
Os03t0103000-01	Rice	cytosol, peroxisome, plasma membrane	34.82	35.82
Os08t0155400-01	Rice	plasma membrane	30.69	35.43
Os02t0580900-01	Rice	plasma membrane	35.48	35.3
Os06t0581000-01	Rice	plasma membrane	33.33	34.24
Os04t0491500-02	Rice	plasma membrane	29.87	32.5
Os12t0231000-01	Rice	plasma membrane	31.19	32.42
Os04t0441800-01	Rice	plasma membrane	31.68	31.42
Os11t0284300-00	Rice	mitochondrion	15.68	30.16
Os11t0283500-01	Rice	plasma membrane	28.71	29.85
Os11t0235200-01	Rice	plasma membrane	30.36	29.39
Os11t0282800-00	Rice	plasma membrane	28.55	28.69
Os04t0464400-00	Rice	peroxisome, plasma membrane	26.4	25.68
Os04t0491200-00	Rice	plasma membrane, vacuole	18.32	16.95
Os04t0491350-00	Rice	plasma membrane	0.33	0.43
Os01t0749000-02	Rice	cytosol, plastid	0.0	0.0

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	EntrezGene:4326444	EMBL:AK070557	ProteinID:BAB16322.1	ProteinID:BAB92147.1
ProteinID:BAF03669.1	ProteinID:BAS69941.1	ProteinID:BAS69942.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006857	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	InterPro:MFS_trans_sf	EnsemblPlantsGene:Os01g0103100	EnsemblPlants:Os01t0103100-01	PFAM:PF00854	InterPro:POT_fam
ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF112	InterPro:PTR2_symporter_CS	UniProt:Q9FTZ3	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI00000ABC5C	RefSeq:XP_015628217.1	SEG:seg	:	:

Description

TGF-beta receptor, type I/II extracellular region family protein. (Os01t0103100-01);Similar to predicted protein. (Os01t0103100-02)

Coordinates

chr1:+:178607..180548

Molecular Weight (calculated)

66441.2 Da

IEP (calculated)

8.321

GRAVY (calculated)

0.343

Length

606 amino acids

Sequence
(BLAST)

001: MDHHPIPADE NEMTSTSPQM QMRRNKLSSH FQGDIDDDGG VGVVDIRGSP MGSAELARTG GWVAAVFIFG NEMAERMAYY GLSLNMVIFM FNVMHRPFAA
101: SANAVNNFLG ISQASSLLGG FLADAYLGRY WTIAAFTTLY LLGLVALTLC ATMPALQAPG QDECDGFAKL LGKCQQPHPW QMAYLYAALY TTALGAAGIR
201: PCVSSFGADQ FEERSPVLDR FFNLFYLAVT VGAIAAFTLL VYVQRNHGWA AAFGALALAM AASNALFFMG TPLYRHRVPG GSPLTRVAQV LVAAYRKRHI
301: KHTTELLYEV GGAKSAVRGS GKIEHTEELR WLDKAAVRVE GQEEINNPWR LCTVTQVEEV KILVRLAPVS ACTVMLSVVL TEFLTLSVQQ AYTLNTRGLP
401: VACMPVFPCL AILLLLALYY RAFAPLARRL TGHPHGASQL QRLGLGLLLS TLSVAWAGLF ERYRRAYAIR HGFLPLFLTP MPGLSAYWLL IQYCLIGLAE
501: VFCLVALLEF LYQEAPDAMR SLASAYAALA GGLGCFLATA INTAVDSITG DIDAGRPSWL AQNINVGKFD YFYWLLAVLS TINLIVFIYF AKAYKYRIKP
601: PTTPHN

Best Arabidopsis Sequence Match ( AT5G13400.1 )
(BLAST)

001: MVASEIKSPV SVPETPGSSS VHHRKQLSVF FIESDNRRLA LGRGYTGGTT PVNIHGKPIA NLSKTGGWIA AFFIFGNEMA ERMAYFGLSV NMVAFMFYVM
101: HRPFESSSNA VNNFLGISQA SSVLGGFLAD AYLGRYWTIA IFTTMYLVGL IGITLGASLK MFVPDQSNCG QLSLLLGNCE EAKSWQMLYL YTVLYITGFG
201: AAGIRPCVSS FGADQFDEKS KDYKTHLDRF FNFFYLSVTL GAIIAFTLVV YVQMELGWGM AFGTLAVAMG ISNALFFAGT PLYRHRLPGG SPLTRVAQVL
301: VAAFRKRNAA FTSSEFIGLY EVPGLKSAIN GSRKIPHSND FIWLDKAALE LKEDGLEPSP WKLCTVTQVE EVKILIRLIP IPTCTIMLSL VLTEYLTLSV
401: QQAYTLNTHI QHLKLPVTCM PVFPGLSIFL ILSLYYSVFV PITRRITGNP HGASQLQRVG IGLAVSIISV AWAGLFENYR RHYAIQNGFE FNFLTQMPDL
501: TAYWLLIQYC LIGIAEVFCI VGLLEFLYEE APDAMKSIGS AYAALAGGLG CFAATILNNI VKAATRDSDG KSWLSQNINT GRFDCLYWLL TLLSFLNFCV
601: FLWSAHRYKY RAIESEEDKS SAVL

Arabidopsis Description

NPF6.1Protein NRT1/ PTR FAMILY 6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYR6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.