Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- nucleus 1
- vacuole 2
- endoplasmic reticulum 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
plastid: 27992503 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G388000.1 | Wheat | plasma membrane | 66.67 | 69.07 |
| TraesCS5D01G398000.1 | Wheat | plasma membrane | 65.67 | 68.16 |
| HORVU5Hr1G095020.1 | Barley | plasma membrane | 65.51 | 67.64 |
| OQU83318 | Sorghum | mitochondrion, plasma membrane | 57.21 | 67.25 |
| Os11t0283500-01 | Rice | plasma membrane | 62.35 | 64.49 |
| TraesCS5B01G393100.1 | Wheat | plasma membrane | 49.42 | 61.7 |
| Os12t0231000-01 | Rice | plasma membrane | 55.22 | 57.12 |
| Os11t0284300-00 | Rice | mitochondrion | 29.02 | 55.56 |
| Os04t0491500-02 | Rice | plasma membrane | 48.76 | 52.78 |
| PGSC0003DMT400030530 | Potato | mitochondrion | 22.72 | 39.03 |
| Solyc04g079510.1.1 | Tomato | plasma membrane | 35.32 | 37.3 |
| Solyc04g079520.2.1 | Tomato | plasma membrane | 35.66 | 36.94 |
| PGSC0003DMT400030533 | Potato | plasma membrane | 34.99 | 36.25 |
| KRH51937 | Soybean | plasma membrane | 34.33 | 36.19 |
| Solyc04g079530.2.1 | Tomato | plasma membrane | 34.49 | 35.92 |
| KRG96656 | Soybean | plasma membrane | 34.16 | 35.76 |
| PGSC0003DMT400030534 | Potato | plasma membrane | 34.66 | 35.73 |
| KRH68384 | Soybean | plasma membrane | 33.83 | 35.05 |
| KRH61236 | Soybean | plasma membrane | 34.49 | 33.99 |
| Os08t0155400-01 | Rice | plasma membrane | 29.52 | 33.9 |
| KRH19434 | Soybean | plasma membrane | 33.17 | 33.9 |
| Solyc10g039290.1.1 | Tomato | plasma membrane | 32.01 | 33.74 |
| Os06t0581000-01 | Rice | plasma membrane | 32.84 | 33.56 |
| KRH02511 | Soybean | plasma membrane | 33.0 | 33.5 |
| Os04t0441800-01 | Rice | plasma membrane | 33.66 | 33.22 |
| VIT_14s0060g00220.t01 | Wine grape | plasma membrane | 34.0 | 33.17 |
| KRH33721 | Soybean | plasma membrane | 33.17 | 33.11 |
| KRG90426 | Soybean | plasma membrane | 32.84 | 32.95 |
| PGSC0003DMT400011063 | Potato | cytosol | 31.84 | 32.93 |
| Os10t0554200-02 | Rice | plasma membrane | 32.34 | 32.72 |
| VIT_18s0001g11280.t01 | Wine grape | plastid | 34.33 | 32.55 |
| PGSC0003DMT400054593 | Potato | plasma membrane | 32.84 | 32.25 |
| Os11t0235200-01 | Rice | plasma membrane | 33.33 | 32.11 |
| Os02t0580900-01 | Rice | plasma membrane | 32.01 | 31.69 |
| Os03t0103000-01 | Rice | cytosol, peroxisome, plasma membrane | 30.35 | 31.07 |
| Solyc01g102360.1.1 | Tomato | plasma membrane | 31.34 | 31.03 |
| PGSC0003DMT400046950 | Potato | plasma membrane | 31.01 | 30.61 |
| Os01t0103100-01 | Rice | plasma membrane | 28.69 | 28.55 |
| GSMUA_Achr11P... | Banana | plasma membrane | 30.51 | 27.84 |
| Os04t0491200-00 | Rice | plasma membrane, vacuole | 28.52 | 26.26 |
| Os04t0464400-00 | Rice | peroxisome, plasma membrane | 19.9 | 19.26 |
| Os04t0491350-00 | Rice | plasma membrane | 0.66 | 0.86 |
| Os01t0749000-02 | Rice | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | EntrezGene:4350283 | ProteinID:ABA92701.2 | ProteinID:BAT13604.1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0055085 | InterPro:MFS_trans_sf | EnsemblPlantsGene:Os11g0282800 | EnsemblPlants:Os11t0282800-00 | PFAM:PF00854 |
| InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF140 | UniProt:Q2R733 | SUPFAM:SSF103473 | TMHMM:TMhelix |
| UniParc:UPI0000D89A63 | RefSeq:XP_015615601.1 | SEG:seg | : | : | : |
Description
Similar to POT family protein, expressed. (Os11t0282800-00)
Coordinates
chr11:+:10096301..10102638
Molecular Weight (calculated)
64474.7 Da
IEP (calculated)
8.297
GRAVY (calculated)
0.468
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSGLVDW RGRPVDTWKH GGVRASIYIH MLVWLSNVSN IGNMTNIVSY LSVKMNMGVA AASTTSASFV AMMQVFTIPA AFLADSYLKR VYTVLFFAPI
101: EILGYILLAI QAHVPSLHPA PCELAGAAAG AGAGATAATT EAAPGTCETV HGSNLSLLML GLYLICVGEG AVRACLPALG GDQFDEGDAA EQRQAASFFN
201: WYAFAVSLGA LVGLVAVVWV QDNKGWDAGF AVCGAVVLLG LLVWAAGMPT YRNKVPAGSP ITRILQVLVV AFKKRNLQLP ENPDELYQPT NDDSAKGLEI
301: LQRTRGLKCL DKAAIVRGGG SNGGAWSVCS VSQVEETKIV LRMVPIFLTA ALGYMPVSVV LTFTVQQGNI MDTRMGAIRV SPATLFVIPT VFQLAILVVY
401: DRAVVPALRR ATGRVGGVTH LQRIGVGFVS SLASCAVAAA VEVKRRRLVA SSSSSAMMSV FWLTPQFFLL GVVDVTSFVG LLEFFSSEAS DGMKSIGSSI
501: FYCMLGMAAW LNTMLIELVN RVTRRRGGGG WLDGANLNES RLDLFYWLVS GIELVAFMAY LLFAWRYVYR NDQRIAAAAA DAVDEQEDKK AASNGSLVQI
601: NLI
101: EILGYILLAI QAHVPSLHPA PCELAGAAAG AGAGATAATT EAAPGTCETV HGSNLSLLML GLYLICVGEG AVRACLPALG GDQFDEGDAA EQRQAASFFN
201: WYAFAVSLGA LVGLVAVVWV QDNKGWDAGF AVCGAVVLLG LLVWAAGMPT YRNKVPAGSP ITRILQVLVV AFKKRNLQLP ENPDELYQPT NDDSAKGLEI
301: LQRTRGLKCL DKAAIVRGGG SNGGAWSVCS VSQVEETKIV LRMVPIFLTA ALGYMPVSVV LTFTVQQGNI MDTRMGAIRV SPATLFVIPT VFQLAILVVY
401: DRAVVPALRR ATGRVGGVTH LQRIGVGFVS SLASCAVAAA VEVKRRRLVA SSSSSAMMSV FWLTPQFFLL GVVDVTSFVG LLEFFSSEAS DGMKSIGSSI
501: FYCMLGMAAW LNTMLIELVN RVTRRRGGGG WLDGANLNES RLDLFYWLVS GIELVAFMAY LLFAWRYVYR NDQRIAAAAA DAVDEQEDKK AASNGSLVQI
601: NLI
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.