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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • golgi 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400030534 Potato plasma membrane 95.97 93.68
Solyc04g079520.2.1 Tomato plasma membrane 71.98 70.62
Solyc04g079530.2.1 Tomato plasma membrane 70.93 69.95
KRH51937 Soybean plasma membrane 67.25 67.13
KRH61236 Soybean plasma membrane 67.43 62.91
VIT_18s0001g11280.t01 Wine grape plastid 68.65 61.64
Solyc10g039290.1.1 Tomato plasma membrane 43.78 43.71
Solyc01g102360.1.1 Tomato plasma membrane 46.23 43.35
Solyc03g005950.1.1 Tomato plasma membrane 45.88 41.79
Solyc05g007000.2.1 Tomato plasma membrane 40.63 40.85
Solyc04g005790.2.1 Tomato plasma membrane 41.33 40.62
Solyc05g006990.2.1 Tomato endoplasmic reticulum, peroxisome, plasma membrane 41.33 40.27
Solyc11g042820.1.1 Tomato peroxisome, plasma membrane, vacuole 40.81 39.29
Zm00001d004621_P001 Maize plasma membrane 33.1 38.89
Solyc01g103030.2.1 Tomato cytosol, peroxisome, plasma membrane 40.81 38.45
Solyc08g061010.2.1 Tomato plasma membrane 17.86 38.35
TraesCS5A01G056100.1 Wheat plasma membrane 31.87 38.32
EES15876 Sorghum plasma membrane 37.48 38.08
Solyc07g032490.2.1 Tomato plasma membrane 37.65 37.79
TraesCS5A01G388000.1 Wheat plasma membrane 38.35 37.63
EES15875 Sorghum plasma membrane 37.48 37.61
Zm00001d041163_P001 Maize plasma membrane 37.83 37.5
OQU83318 Sorghum mitochondrion, plasma membrane 33.63 37.43
Os04t0491500-02 Rice plasma membrane 36.25 37.16
HORVU5Hr1G095020.1 Barley plasma membrane 38.0 37.16
Solyc01g096880.2.1 Tomato plasma membrane 37.3 37.11
TraesCS2D01G259400.2 Wheat plasma membrane 37.48 36.96
TraesCS2B01G277600.1 Wheat plasma membrane 37.13 36.74
TraesCS5B01G060800.1 Wheat plasma membrane 36.08 36.72
TraesCS2A01G264500.1 Wheat plasma membrane 37.13 36.61
Solyc08g078950.2.1 Tomato cytosol, peroxisome, plasma membrane 37.83 36.61
TraesCS2A01G350100.1 Wheat plasma membrane 35.73 36.49
TraesCS5A01G056200.2 Wheat plasma membrane 35.9 36.48
KXG28299 Sorghum plasma membrane 36.78 36.4
Zm00001d003208_P001 Maize plasma membrane 29.25 36.38
OQU81850 Sorghum plasma membrane 35.03 36.36
TraesCS5D01G067100.1 Wheat plasma membrane 35.73 36.36
HORVU2Hr1G062730.7 Barley plasma membrane 36.78 36.33
TraesCS5B01G060500.1 Wheat plasma membrane 35.55 36.25
HORVU2Hr1G085210.21 Barley plasma membrane 35.55 36.19
TraesCS5D01G067400.1 Wheat plasma membrane 35.38 36.01
TraesCS2D01G348500.1 Wheat plasma membrane 35.2 35.96
TraesCS2D01G348600.1 Wheat plasma membrane 35.2 35.96
TraesCS2A01G350300.1 Wheat plasma membrane 33.27 35.78
Os12t0231000-01 Rice plasma membrane 36.43 35.68
TraesCS5D01G398000.1 Wheat plasma membrane 36.25 35.63
TraesCS2B01G368700.1 Wheat plasma membrane 34.68 35.42
OQU81851 Sorghum plasma membrane 34.85 35.35
Os11t0282800-00 Rice plasma membrane 37.3 35.32
Os11t0283500-01 Rice plasma membrane 35.9 35.16
EES15877 Sorghum plasma membrane 35.2 35.14
KXG26617 Sorghum plasma membrane 36.08 34.97
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 36.08 34.92
Solyc03g113250.2.1 Tomato plasma membrane 36.78 34.43
TraesCS2B01G368600.2 Wheat plasma membrane 35.03 34.42
HORVU2Hr1G007730.1 Barley mitochondrion 21.19 34.38
TraesCS5B01G393100.1 Wheat plasma membrane 29.07 34.37
Solyc06g060620.2.1 Tomato plasma membrane 35.38 34.12
EES14657 Sorghum plasma membrane 33.45 33.51
Solyc12g006050.1.1 Tomato cytosol, peroxisome, plasma membrane 34.68 33.45
Solyc07g049290.2.1 Tomato nucleus 34.5 33.33
EES11151 Sorghum plasma membrane 33.45 32.82
TraesCS2A01G350000.1 Wheat plasma membrane 30.65 32.35
Solyc08g061020.1.1 Tomato plasma membrane 16.81 32.0
TraesCS2D01G348400.1 Wheat plasma membrane 30.47 31.64
TraesCS2B01G368500.1 Wheat plasma membrane 30.47 31.64
Os11t0284300-00 Rice mitochondrion 17.34 31.43
TraesCS2B01G368400.1 Wheat plasma membrane 30.12 31.27
EES12425 Sorghum plasma membrane 29.07 30.51
Zm00001d025748_P001 Maize plasma membrane 28.37 29.51
HORVU2Hr1G085260.3 Barley plasma membrane 23.47 26.12
Os04t0491200-00 Rice plasma membrane, vacuole 23.29 20.31
Os04t0491350-00 Rice plasma membrane 0.53 0.65
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846
UniProt:K4BV35InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654
PANTHER:PTHR11654:SF113SUPFAM:SSF103473EnsemblPlantsGene:Solyc04g079510.1EnsemblPlants:Solyc04g079510.1.1TMHMM:TMhelixUniParc:UPI00027671AD
SEG:seg:::::
Description
No Description!
Coordinates
chr4:+:63957732..63959897
Molecular Weight (calculated)
63923.1 Da
IEP (calculated)
8.764
GRAVY (calculated)
0.290
Length
571 amino acids
Sequence
(BLAST)
001: MGMWRDVKTE PKQPPRLGGN RAALFAYAIA GIDVMAFFAT GVSLVTYFYG YMNFSITESA TAVTNFMGTA FFLSLFGAFL SDTYLSRFKT CVLFGCIEVV
101: GYALLAVQAH FRQLRPFPCK DVPLSQMNQC ESANKGQLAI LYVGLYLVAI GTSGVKAAAP PLGADQYDEK DPKEAAKLSS YFNWLMFFLT TGALFGVTFV
201: VWISENQGWD WSFAVCSIVV GFAILFLTLG KSLYRNNVTK GSPLTRIMQV FVVALRNRNL RLPENEHELH EIQDKEARYH TEILQKTEQF KFLDRAAINR
301: TDQEASTSNA HGPWKLCTVT QVEETKIVIR MLPIILSTVF MNTCLAQLQT FTIQQSTTMD RKIHKFEVPG ASIPAIPLLF MIILIPIYER VFIPIARKFT
401: GIPTGIRQLQ RIGIGLVLSS ISMAVAAIVE KHRKSIAIKH NMVESAAPLP MSVFWLGYQY AIFGLADMFT LVGLLDFFYS ESSSSMKALS TAISWSSLAI
501: GYYTSSIIVS LVNKVSGGWL ANNNLNKDEL DYFYWLLSGL SVLNFGFYLL CASWYKYKKI DMNPEAEMSI V
Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.