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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:vacuole
PProwler:secretory
PTS1:peroxisome
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400007441 Potato plasma membrane 95.53 95.03
Solyc05g007000.2.1 Tomato plasma membrane 77.11 78.87
Solyc05g006990.2.1 Tomato endoplasmic reticulum, peroxisome, plasma membrane 79.52 78.84
KRH69373 Soybean plasma membrane 71.26 71.38
VIT_01s0026g01570.t01 Wine grape plasma membrane 71.77 71.28
KRH74766 Soybean plasma membrane 70.4 70.64
KRG99175 Soybean plasma membrane 70.91 70.43
KRH45840 Soybean plasma membrane 71.43 69.87
GSMUA_Achr7P08880_001 Banana plasma membrane 66.44 69.8
KRH45842 Soybean plasma membrane 70.4 68.86
Zm00001d046383_P001 Maize plasma membrane 67.47 66.22
TraesCS7A01G365100.1 Wheat plasma membrane 66.27 65.59
EER89980 Sorghum plasma membrane 67.81 65.45
Os06t0581000-01 Rice plasma membrane 66.27 65.25
GSMUA_Achr2P16840_001 Banana plasma membrane, plastid 64.89 62.52
TraesCS7D01G357300.2 Wheat plasma membrane 66.44 62.46
Zm00001d036942_P001 Maize plasma membrane 58.0 62.41
Zm00001d036941_P001 Maize plasma membrane 63.86 60.92
HORVU7Hr1G086170.5 Barley cytosol, peroxisome, plastid 66.09 60.86
GSMUA_Achr6P00820_001 Banana plasma membrane 65.23 59.97
Solyc03g113250.2.1 Tomato plasma membrane 58.86 56.07
TraesCS7B01G262200.1 Wheat plasma membrane, plastid 66.44 55.94
Solyc04g079510.1.1 Tomato plasma membrane 40.62 41.33
Solyc10g039290.1.1 Tomato plasma membrane 38.73 39.34
Solyc04g079520.2.1 Tomato plasma membrane 39.07 39.0
Solyc01g103030.2.1 Tomato cytosol, peroxisome, plasma membrane 39.93 38.28
Solyc01g102360.1.1 Tomato plasma membrane 39.41 37.6
Solyc03g005950.1.1 Tomato plasma membrane 40.45 37.48
Solyc04g079530.2.1 Tomato plasma membrane 37.18 37.31
Solyc08g078950.2.1 Tomato cytosol, peroxisome, plasma membrane 37.52 36.95
Solyc11g042820.1.1 Tomato peroxisome, plasma membrane, vacuole 37.69 36.93
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 37.01 36.44
Solyc01g096880.2.1 Tomato plasma membrane 35.63 36.06
Solyc07g032490.2.1 Tomato plasma membrane 35.28 36.03
Solyc06g060620.2.1 Tomato plasma membrane 36.32 35.64
Solyc12g006050.1.1 Tomato cytosol, peroxisome, plasma membrane 34.94 34.29
Solyc07g049290.2.1 Tomato nucleus 34.42 33.84
Solyc08g061020.1.1 Tomato plasma membrane 17.38 33.67
Solyc08g061010.2.1 Tomato plasma membrane 15.15 33.08
Protein Annotations
EnsemblPlants:Solyc04g005790.2.1EnsemblPlantsGene:Solyc04g005790.2GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:MFS_trans_sf
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF98PFAM:PF00854SEG:segSUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI00027665E0UniProt:K4BNI5MapMan:11.1.4.1MapMan:24.2.2.9:
Description
No Description!
Coordinates
chr4:-:500464..507053
Molecular Weight (calculated)
64104.6 Da
IEP (calculated)
8.934
GRAVY (calculated)
0.425
Length
581 amino acids
Sequence
(BLAST)
001: MEVESQSKLI STNWEGYVDW RNRPALINRH GGLVASSFVL VVEVLENLAY LANASNLVMY LSEYMHYSPT NSANCVTNFM GTAFLLALLG GFLSDAFFTT
101: YHIYLISAFI EFLGLVILTI QARSDSLKPS KCKPEMACEQ VRGAQAAMLF IGLYLVALGV GGIKGSLPPH GAEQFDGETP QGRKQRSTFF NYFVFCLSCG
201: GLIAVTFVVW VEDNKGWQWG FGISTLAILL SIPIFLAGSP FYRNKIPRGS PLTTISKVLI AAMVNSCAWT NSSSVIASLG SSPSTIPVLS NEDEEISRNN
301: KHIVESKSLR FLNRAAVKKP AAASGVLQCS VQEVEEVKIV VKILPIFGCT IMLNCCLAQL STFSVQQAAT MNTKFGKLKV PPASLPIFPV LFIMILAPIF
401: DYFIIPFARK VTKTEMGITH LQRIGIGLFL SVIAMAIAAL VEIKRKRVAT DSSLLDSSKP LPITFFWIAI QYLFLGSADL FTLAGLLEFC FSEAAFSMRS
501: LATSLSWASL AIGYYLSTVI VSIVNNVTGD SKHQPWLTGK NLNHFHLERF YWLMCILSAL NFVHYLYWAR KYKYTSVSSQ G
Best Arabidopsis Sequence Match ( AT1G69850.1 )
(BLAST)
001: MEVEEEVSRW EGYADWRNRA AVKGRHGGML AASFVLVVEI LENLAYLANA SNLVLYLREY MHMSPSKSAN DVTNFMGTAF LLALLGGFLS DAFFSTFQIF
101: LISASIEFLG LIILTIQART PSLMPPSCDS PTCEEVSGSK AAMLFVGLYL VALGVGGIKG SLASHGAEQF DESTPKGRKQ RSTFFNYFVF CLACGALVAV
201: TFVVWLEDNK GWEWGFGVST IAIFVSILIF LSGSRFYRNK IPCGSPLTTI LKVLLAASVK CCSSGSSSNA VASMSVSPSN HCVSKGKKEV ESQGELEKPR
301: QEEALPPRAQ LTNSLKVLNG AADEKPVHRL LECTVQQVED VKIVLKMLPI FACTIMLNCC LAQLSTFSVQ QAASMNTKIG SLKIPPASLP IFPVVFIMIL
401: APIYDHLIIP FARKATKTET GVTHLQRIGV GLVLSILAMA VAALVEIKRK GVAKDSGLLD SKETLPVTFL WIALQYLFLG SADLFTLAGL LEYFFTEAPS
501: SMRSLATSLS WASLAMGYYL SSVIVSIVNS ITGSSGNTPW LRGKSINRYK LDYFYWLMCV LSAANFLHYL FWAMRYKYRS TGSRS
Arabidopsis Description
NPF4.6Protein NRT1/ PTR FAMILY 4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H157]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.