Factsheet for VIT_01s0026g01570.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
vacuole 2
extracellular 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69373	Soybean	plasma membrane	75.21	75.86
KRH74766	Soybean	plasma membrane	74.87	75.65
KRG99175	Soybean	plasma membrane	75.38	75.38
KRH45840	Soybean	plasma membrane	76.41	75.25
KRH45842	Soybean	plasma membrane	74.53	73.4
Solyc05g007000.2.1	Tomato	plasma membrane	70.77	72.89
Solyc05g006990.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	72.65	72.53
PGSC0003DMT400045415	Potato	plasma membrane	71.28	72.52
PGSC0003DMT400007441	Potato	plasma membrane	71.97	72.09
Solyc04g005790.2.1	Tomato	plasma membrane	71.28	71.77
GSMUA_Achr7P08880_001	Banana	plasma membrane	67.69	71.61
VIT_17s0000g05640.t01	Wine grape	cytosol, plasma membrane, plastid	72.65	69.67
Os06t0581000-01	Rice	plasma membrane	69.23	68.64
PGSC0003DMT400045412	Potato	mitochondrion	72.14	67.3
Zm00001d046383_P001	Maize	plasma membrane	68.03	67.23
TraesCS7A01G365100.1	Wheat	plasma membrane	67.18	66.95
EER89980	Sorghum	plasma membrane	68.38	66.45
GSMUA_Achr2P16840_001	Banana	plasma membrane, plastid	67.01	65.01
TraesCS7D01G357300.2	Wheat	plasma membrane	67.69	64.08
Zm00001d036942_P001	Maize	plasma membrane	58.12	62.96
HORVU7Hr1G086170.5	Barley	cytosol, peroxisome, plastid	67.35	62.44
Zm00001d036941_P001	Maize	plasma membrane	64.96	62.4
GSMUA_Achr6P00820_001	Banana	plasma membrane	66.32	61.39
TraesCS7B01G262200.1	Wheat	plasma membrane, plastid	67.52	57.25
VIT_18s0001g11280.t01	Wine grape	plastid	41.37	38.05
VIT_12s0035g01820.t01	Wine grape	golgi, peroxisome, plasma membrane	39.32	37.7
VIT_14s0060g00220.t01	Wine grape	plasma membrane	39.15	37.05
VIT_02s0154g00260.t01	Wine grape	plastid	38.46	34.94
VIT_11s0016g05170.t01	Wine grape	plasma membrane	34.36	34.9
VIT_11s0016g05180.t01	Wine grape	plasma membrane	33.5	33.5
VIT_02s0087g00580.t01	Wine grape	plasma membrane	16.75	33.11
VIT_12s0059g01240.t01	Wine grape	plastid	36.07	32.51
VIT_01s0150g00250.t01	Wine grape	cytosol, peroxisome, plasma membrane	32.14	29.38
VIT_18s0089g01010.t01	Wine grape	plasma membrane	39.66	25.64

Protein Annotations

EntrezGene:100258696	wikigene:100258696	MapMan:11.1.4.1	MapMan:24.2.2.9	ProteinID:CCB56584	ProteinID:CCB56584.1
UniProt:F6HPF6	EMBL:FN596002	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EntrezGene:LOC100258696
wikigene:LOC100258696	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF98
SUPFAM:SSF103473	TIGR:TC65916	TIGR:TC68753	TMHMM:TMhelix	UniParc:UPI000210800D	ArrayExpress:VIT_01s0026g01570
EnsemblPlantsGene:VIT_01s0026g01570	EnsemblPlants:VIT_01s0026g01570.t01	unigene:Vvi.6105	RefSeq:XP_002269693	RefSeq:XP_002269693.2	RefSeq:XP_010652497.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:10647726..10651868

Molecular Weight (calculated)

64430.8 Da

IEP (calculated)

9.290

GRAVY (calculated)

0.312

Length

585 amino acids

Sequence
(BLAST)

001: MEEGNQQHRW EGYVDWRGRP ALRGRHGGML AASFVLGVEI LENLAFLSNA SNLVRYLSDY MHFSPSKSAN NVTNFMGTAF LLALLGGFLS DAFFTPYHIY
101: LISAVIEFLG LIVLTIQARS PSLKPLECKK GTADTSCQVL SGGKAGMLFV GLYLVALGVG GIKGSLPAHG AEQLDESTPQ GRKQRSTFFN YFVFCLSCGA
201: LIAVTLVVWV EDNKGWEWGF GIATISIFAS IPVFLGGSAT YRNKIPSGSP LTTIFKVLIA ATLNRSPSNA VASMATSPSY PTQNSKEPEE ENGKAIVPAQ
301: TPTESLGFLN RAVVNKPVYK AVECTVQQVE EVKIVIKILP IFACTIMLNC CLAQLSTFSV QQAATMNTKL GSLKVPPASL PIFPVLFMMT LAPIYDHFII
401: PFARKVTKTE MGISHLQRIG IGLVFSIIAM AVAALVEVKR KRVASNLGLI DSTEQLPITF FWIAFQYLFL GSADLFTLAG LMEFFFTEAP TGMRSLATSL
501: SWASLAMGYY LSSVIVSIVN NFLGSLNHRP WLSGRKLNHY HLERFYWLMC VLTGLNFLHY LFWACRYKYR STGATKYQVT NYQST

Best Arabidopsis Sequence Match ( AT1G69850.1 )
(BLAST)

001: MEVEEEVSRW EGYADWRNRA AVKGRHGGML AASFVLVVEI LENLAYLANA SNLVLYLREY MHMSPSKSAN DVTNFMGTAF LLALLGGFLS DAFFSTFQIF
101: LISASIEFLG LIILTIQART PSLMPPSCDS PTCEEVSGSK AAMLFVGLYL VALGVGGIKG SLASHGAEQF DESTPKGRKQ RSTFFNYFVF CLACGALVAV
201: TFVVWLEDNK GWEWGFGVST IAIFVSILIF LSGSRFYRNK IPCGSPLTTI LKVLLAASVK CCSSGSSSNA VASMSVSPSN HCVSKGKKEV ESQGELEKPR
301: QEEALPPRAQ LTNSLKVLNG AADEKPVHRL LECTVQQVED VKIVLKMLPI FACTIMLNCC LAQLSTFSVQ QAASMNTKIG SLKIPPASLP IFPVVFIMIL
401: APIYDHLIIP FARKATKTET GVTHLQRIGV GLVLSILAMA VAALVEIKRK GVAKDSGLLD SKETLPVTFL WIALQYLFLG SADLFTLAGL LEYFFTEAPS
501: SMRSLATSLS WASLAMGYYL SSVIVSIVNS ITGSSGNTPW LRGKSINRYK LDYFYWLMCV LSAANFLHYL FWAMRYKYRS TGSRS

Arabidopsis Description

NPF4.6Protein NRT1/ PTR FAMILY 4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H157]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.