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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g007000.2.1 Tomato plasma membrane 92.7 93.84
PGSC0003DMT400045412 Potato mitochondrion 88.52 81.18
PGSC0003DMT400007441 Potato plasma membrane 80.17 78.94
KRH69373 Soybean plasma membrane 73.57 72.93
KRH74766 Soybean plasma membrane 72.17 71.68
VIT_01s0026g01570.t01 Wine grape plasma membrane 72.52 71.28
KRG99175 Soybean plasma membrane 71.3 70.09
GSMUA_Achr7P08880_001 Banana plasma membrane 66.78 69.44
KRH45840 Soybean plasma membrane 71.48 69.19
KRH45842 Soybean plasma membrane 69.91 67.68
Zm00001d046383_P001 Maize plasma membrane 68.7 66.72
Os06t0581000-01 Rice plasma membrane 68.35 66.61
EER89980 Sorghum plasma membrane 68.35 65.28
TraesCS7A01G365100.1 Wheat plasma membrane 66.61 65.25
PGSC0003DMT400065182 Potato plasma membrane 65.39 63.84
Zm00001d036942_P001 Maize plasma membrane 58.61 62.41
GSMUA_Achr2P16840_001 Banana plasma membrane, plastid 65.39 62.35
TraesCS7D01G357300.2 Wheat plasma membrane 66.78 62.14
Zm00001d036941_P001 Maize plasma membrane 64.7 61.08
HORVU7Hr1G086170.5 Barley cytosol, peroxisome, plastid 66.61 60.7
GSMUA_Achr6P00820_001 Banana plasma membrane 65.57 59.65
TraesCS7B01G262200.1 Wheat plasma membrane, plastid 66.96 55.8
PGSC0003DMT400030533 Potato plasma membrane 40.17 39.69
PGSC0003DMT400030534 Potato plasma membrane 40.0 39.32
PGSC0003DMT400011063 Potato cytosol 39.48 38.94
PGSC0003DMT400012226 Potato cytosol, peroxisome, plasma membrane 39.13 38.14
PGSC0003DMT400053373 Potato cytosol, peroxisome, plasma membrane 40.0 38.02
PGSC0003DMT400030530 Potato mitochondrion 22.96 37.61
PGSC0003DMT400070732 Potato plasma membrane 37.57 37.57
PGSC0003DMT400032493 Potato cytosol, peroxisome, plasma membrane 38.26 37.29
PGSC0003DMT400046950 Potato plasma membrane 39.13 36.82
PGSC0003DMT400054593 Potato plasma membrane 38.96 36.48
PGSC0003DMT400035882 Potato plasma membrane 37.22 36.15
PGSC0003DMT400075163 Potato plasma membrane 36.0 35.69
PGSC0003DMT400082762 Potato plasma membrane 28.0 35.62
PGSC0003DMT400001784 Potato cytosol, peroxisome, plasma membrane 35.65 34.57
PGSC0003DMT400010957 Potato cytosol, peroxisome, plasma membrane 35.3 34.29
PGSC0003DMT400053569 Potato endoplasmic reticulum, plasma membrane 15.83 34.21
PGSC0003DMT400071504 Potato plasma membrane 33.39 32.16
PGSC0003DMT400072037 Potato cytosol, peroxisome, plasma membrane 33.91 29.86
Protein Annotations
Gene3D:1.20.1250.20EntrezGene:102578808MapMan:11.1.4.1MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085UniProt:M1BHM6InterPro:MFS_trans_sfPFAM:PF00854EnsemblPlantsGene:PGSC0003DMG400017621PGSC:PGSC0003DMG400017621
EnsemblPlants:PGSC0003DMT400045415InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF98SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI000294D418RefSeq:XP_006357287.1SEG:seg:::
Description
Nitrate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400017621]
Coordinates
chr5:-:6000174..6006202
Molecular Weight (calculated)
62980.1 Da
IEP (calculated)
8.689
GRAVY (calculated)
0.487
Length
575 amino acids
Sequence
(BLAST)
001: MEIDNQSNWD SYVDWKNRPA INNRHGGLLA ASFVLGVEVL ENLAFLANAS NLVLYISEYM HFSPSTSANS VTNFMGTAFL LALLGGFLSD AFFTTYYIYL
101: ISALIEFLGL VILTIQARSS SLMPRKCELG VPNMPCEQVH GAQAAMLFIG LYLVALGVGG IKGSLPPHGA EQFDESTPRG RKQRSTFFNY FVFCLSFGAL
201: IAVTLVVWME DNKGWQWGFG IATLAIFLSI PIFLAGSPFY RNKIPRGSPL TTINKVIIAA LLNSSASSSK NSSTVIASMT SSPSPPIPTS KDVESIETAP
301: SSSFSFLNRA VSDTPACGAL KCTVQQVEEV KIVMKLLPIF ACTIMLNCCL AQLNTFSVHQ AASMNTKVGS LKVPPASLPV FPVVFIMILA PVYDHFIIPF
401: TRRVTKTEMG ISHLQRIGIG LFLSIVAMAI AALVEIKRKG VVTDSGLIDS AKPLPITFFW IAFQYLFLGS ADLFVLAGLL EFCFSEAPVS MRSLATSLSW
501: ASLAIGYYLS SVIVSIVNRV TGISTNKPWL AGSNLNHYHL ERFYWLMCIL SALNFMHYLF WATKYKYTSV TSSRC
Best Arabidopsis Sequence Match ( AT1G69850.1 )
(BLAST)
001: MEVEEEVSRW EGYADWRNRA AVKGRHGGML AASFVLVVEI LENLAYLANA SNLVLYLREY MHMSPSKSAN DVTNFMGTAF LLALLGGFLS DAFFSTFQIF
101: LISASIEFLG LIILTIQART PSLMPPSCDS PTCEEVSGSK AAMLFVGLYL VALGVGGIKG SLASHGAEQF DESTPKGRKQ RSTFFNYFVF CLACGALVAV
201: TFVVWLEDNK GWEWGFGVST IAIFVSILIF LSGSRFYRNK IPCGSPLTTI LKVLLAASVK CCSSGSSSNA VASMSVSPSN HCVSKGKKEV ESQGELEKPR
301: QEEALPPRAQ LTNSLKVLNG AADEKPVHRL LECTVQQVED VKIVLKMLPI FACTIMLNCC LAQLSTFSVQ QAASMNTKIG SLKIPPASLP IFPVVFIMIL
401: APIYDHLIIP FARKATKTET GVTHLQRIGV GLVLSILAMA VAALVEIKRK GVAKDSGLLD SKETLPVTFL WIALQYLFLG SADLFTLAGL LEYFFTEAPS
501: SMRSLATSLS WASLAMGYYL SSVIVSIVNS ITGSSGNTPW LRGKSINRYK LDYFYWLMCV LSAANFLHYL FWAMRYKYRS TGSRS
Arabidopsis Description
NPF4.6Protein NRT1/ PTR FAMILY 4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H157]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.