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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g042820.1.1 Tomato peroxisome, plasma membrane, vacuole 94.25 71.84
GSMUA_AchrUn_... Banana plasma membrane 28.76 70.27
CDY50182 Canola plasma membrane 66.15 50.85
PGSC0003DMT400053373 Potato cytosol, peroxisome, plasma membrane 67.7 50.58
GSMUA_Achr8P08410_001 Banana plasma membrane 65.04 49.92
Bra028002.1-P Field mustard peroxisome 66.15 49.83
CDX93764 Canola plasma membrane 66.15 49.83
AT1G33440.1 Thale cress plasma membrane 65.93 49.58
GSMUA_Achr5P16920_001 Banana plasma membrane 60.62 49.19
GSMUA_Achr10P... Banana plasma membrane 61.28 49.11
GSMUA_Achr6P07370_001 Banana plasma membrane 60.84 49.11
GSMUA_Achr9P08330_001 Banana plasma membrane 61.95 47.95
OQU83190 Sorghum plasma membrane 59.29 47.35
GSMUA_Achr6P29080_001 Banana plasma membrane 61.5 47.12
HORVU4Hr1G015640.2 Barley golgi, peroxisome, plasma membrane 61.5 46.1
TraesCS4B01G090800.1 Wheat golgi, peroxisome, plasma membrane 61.5 46.03
TraesCS4D01G087900.1 Wheat golgi, peroxisome, plasma membrane 61.5 45.95
TraesCS4A01G225400.1 Wheat golgi, peroxisome, plasma membrane, plastid 61.5 45.87
Os11t0235200-01 Rice plasma membrane 63.05 45.53
Zm00001d007255_P001 Maize plasma membrane 62.17 45.1
GSMUA_Achr8P29280_001 Banana plasma membrane 58.85 41.76
PGSC0003DMT400030530 Potato mitochondrion 29.2 37.61
VIT_18s0089g01010.t01 Wine grape plasma membrane 75.22 37.57
PGSC0003DMT400071504 Potato plasma membrane 41.59 31.49
PGSC0003DMT400011063 Potato cytosol 39.38 30.53
PGSC0003DMT400054593 Potato plasma membrane 40.04 29.48
PGSC0003DMT400030534 Potato plasma membrane 37.83 29.23
PGSC0003DMT400046950 Potato plasma membrane 39.38 29.13
PGSC0003DMT400030533 Potato plasma membrane 37.17 28.87
PGSC0003DMT400045415 Potato plasma membrane 35.62 28.0
PGSC0003DMT400075163 Potato plasma membrane 35.84 27.93
PGSC0003DMT400007441 Potato plasma membrane 36.06 27.91
PGSC0003DMT400012226 Potato cytosol, peroxisome, plasma membrane 36.06 27.63
PGSC0003DMT400035882 Potato plasma membrane 35.18 26.86
PGSC0003DMT400065182 Potato plasma membrane 34.96 26.83
PGSC0003DMT400001784 Potato cytosol, peroxisome, plasma membrane 35.18 26.81
PGSC0003DMT400070732 Potato plasma membrane 34.07 26.78
PGSC0003DMT400032493 Potato cytosol, peroxisome, plasma membrane 34.96 26.78
PGSC0003DMT400010957 Potato cytosol, peroxisome, plasma membrane 34.96 26.69
PGSC0003DMT400045412 Potato mitochondrion 35.62 25.68
PGSC0003DMT400072037 Potato cytosol, peroxisome, plasma membrane 32.52 22.51
PGSC0003DMT400053569 Potato endoplasmic reticulum, plasma membrane 12.39 21.05
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085UniProt:M1D677
InterPro:MFS_trans_sfPFAM:PF00854EnsemblPlantsGene:PGSC0003DMG400032801PGSC:PGSC0003DMG400032801EnsemblPlants:PGSC0003DMT400082762InterPro:POT_fam
PFscan:PS51257PANTHER:PTHR11654PANTHER:PTHR11654:SF198SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI00029692D9
SEG:seg:::::
Description
Proton-dependent oligopeptide transport family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400032801]
Coordinates
chr11:-:28624806..28628332
Molecular Weight (calculated)
50359.1 Da
IEP (calculated)
8.917
GRAVY (calculated)
0.415
Length
452 amino acids
Sequence
(BLAST)
001: MMLSKGKCLK VKGYKAMIFF VALYLVALGS GCLKPNIISH GADQFKKNDS KKLSTYFNFA YFAFCAGELL ALTLVVWIQT HYGMDVGFGV SAAAMVVGLI
101: IFLSGTLVYM NTPPGGSIFI PIAQVFVAAI TKRKQICPSN LKMLHGSQCI VPQDGTLIHT DKFRFLDKAC IKIENGRSTS ESPWRLCTVS QVEQVKILIS
201: VVPIFACTII FNTILAQLQT FSVQQGTVMN TRLTDNFTIP PASLQSIPYF MLIILVPLYE IALVPMIRKF MGNDSGITPL QRVGIGLFIA TFSMVCAALV
301: ENKRRDYSLN QNRILSIFWI VPQFIIYGLS EMFTAVGLIE FFYKQSLEGM QSFLTAMTYC SYSFGFYLSS ILVSLVNRIT STSSSGGGGW LNDNDLNKNR
401: LDLFYWLLAA LSLVNFINYV FCSKWYSYNP SLLPVVPLHE PQAQGHDSEN PN
Best Arabidopsis Sequence Match ( AT1G33440.1 )
(BLAST)
001: MDVHDLSEEA KRGVIHTSEE SLDDLCVDFR GRPCRPSKHG GTRAALFVLG FQAFEMMAIA AVGNNLITYV FNEMHFPLSK SANLVTNFIG TVFLLSLLGG
101: FLSDSYLGSF RTMLVFGVIE ISGFILLSVQ AHLPELRPPE CNMKSTTIHC VEANGYKAAT LYTALCLVAL GSGCLKPNII SHGANQFQRK DLRKLSSFFN
201: AAYFAFSMGQ LIALTLLVWV QTHSGMDVGF GVSAAVMAAG MISLVAGTSF YRNKPPSGSI FTPIAQVFVA AITKRKQICP SNPNMVHQPS TDLVRVKPLL
301: HSNKFRFLDK ACIKTQGKAM ESPWRLCTIE QVHQVKILLS VIPIFACTII FNTILAQLQT FSVQQGSSMN THITKTFQIP PASLQAIPYI ILIFFVPLYE
401: TFFVPLARKL TGNDSGISPL QRIGTGLFLA TFSMVAAALV EKKRRESFLE QNVMLSIFWI APQFLIFGLS EMFTAVGLVE FFYKQSSQSM QSFLTAMTYC
501: SYSFGFYLSS VLVSTVNRVT SSNGSGTKEG WLGDNDLNKD RLDHFYWLLA SLSFINFFNY LFWSRWYSCD PSATHHSAEV NSLEALENGE IKDSTTEKPR
601: I
Arabidopsis Description
NPF4.4Protein NRT1/ PTR FAMILY 4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q56XQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.