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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plastid, plasma membrane

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane, plastid
Any Predictor:golgi, peroxisome, plasma membrane, plastid
MultiLoc:golgi
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G087900.1 Wheat golgi, peroxisome, plasma membrane 97.85 98.02
TraesCS4B01G090800.1 Wheat golgi, peroxisome, plasma membrane 96.86 97.19
HORVU4Hr1G015640.2 Barley golgi, peroxisome, plasma membrane 94.72 95.19
OQU83190 Sorghum plasma membrane 77.89 83.39
Os11t0235200-01 Rice plasma membrane 83.5 80.83
Zm00001d007255_P001 Maize plasma membrane 79.87 77.69
GSMUA_Achr10P... Banana plasma membrane 67.66 72.69
GSMUA_Achr6P07370_001 Banana plasma membrane 65.68 71.07
GSMUA_Achr5P16920_001 Banana plasma membrane 64.85 70.56
GSMUA_Achr9P08330_001 Banana plasma membrane 67.33 69.86
TraesCS2A01G309100.1 Wheat plasma membrane 66.67 69.66
GSMUA_Achr6P29080_001 Banana plasma membrane 67.16 68.98
GSMUA_AchrUn_... Banana plasma membrane 20.79 68.11
Solyc11g042820.1.1 Tomato peroxisome, plasma membrane, vacuole 63.86 65.26
CDX93764 Canola plasma membrane 64.36 65.0
Bra028002.1-P Field mustard peroxisome 64.19 64.83
AT1G33440.1 Thale cress plasma membrane 64.03 64.56
CDY50182 Canola plasma membrane 62.54 64.46
GSMUA_Achr8P29280_001 Banana plasma membrane 65.02 61.85
PGSC0003DMT400082762 Potato plasma membrane 45.87 61.5
VIT_18s0089g01010.t01 Wine grape plasma membrane 67.33 45.08
TraesCS7A01G365100.1 Wheat plasma membrane 37.13 38.33
TraesCS3A01G272600.1 Wheat plasma membrane 32.18 36.59
TraesCS5A01G056100.1 Wheat plasma membrane 28.38 36.21
TraesCS2A01G350300.1 Wheat plasma membrane 31.52 35.97
TraesCS2A01G350100.1 Wheat plasma membrane 33.17 35.96
TraesCS5A01G409600.1 Wheat plasma membrane 35.15 35.86
TraesCS5A01G056200.2 Wheat plasma membrane 32.84 35.41
TraesCS5A01G537100.1 Wheat peroxisome 35.48 35.3
TraesCS2A01G264500.1 Wheat plasma membrane 33.5 35.06
TraesCS1A01G211000.1 Wheat cytosol 34.32 34.96
TraesCS5A01G388000.1 Wheat plasma membrane 33.33 34.71
TraesCS1A01G031300.1 Wheat peroxisome 33.0 34.36
TraesCS7A01G301700.1 Wheat plasma membrane 33.99 34.16
TraesCS1A01G210900.1 Wheat plasma membrane 26.9 33.75
TraesCS2A01G335800.1 Wheat mitochondrion 33.17 33.22
TraesCS2A01G350000.1 Wheat plasma membrane 25.74 28.84
TraesCS3A01G081100.3 Wheat cytosol, peroxisome, plasma membrane, plastid 28.71 27.66
Protein Annotations
EnsemblPlants:TraesCS4A01G225400.1EnsemblPlantsGene:TraesCS4A01G225400GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0022857GO:GO:0055085
InterPro:MFS_trans_sfInterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF198PFAM:PF00854SEG:seg
SUPFAM:SSF103473TMHMM:TMhelixMapMan:24.2.2.9:::
Description
No Description!
Coordinates
chr4A:+:533258157..533262230
Molecular Weight (calculated)
65350.2 Da
IEP (calculated)
8.108
GRAVY (calculated)
0.361
Length
606 amino acids
Sequence
(BLAST)
001: MDVESSRQQG PKGDASSNSM AAASEVSVDW RGRPCRPERH GGMKAAVFVL GIQAFEIMAI AAVGNNLITY VFNEMHFPLS KSANIVTNFI GTMFLLSLLG
101: GFLSDSYLGS FWTMLIFGFV ELSGFILLAV QAHLPQLRPP ACDMKAAGQC EEVAGVKAGI FFAALYLVAL GSGCLKPNII AHGADQFRRD GEDQAVDGGK
201: RLSSYFNAAY FSFCVGEMVA LTVLVWVQTR SGMDVGFGVS AAAMAVGLVS LVAGVFFYRN KPPQGSICTP IAKVFVAAVA KRKQVCPSSR ATVQGMSSTG
301: AHETRLNTTN ICRINKLRFL DKACVKAQDG GSKESEWGLC TAAEVEQVKV LLCVVPIFAC TIVFNTILAQ LQTFSVQQGS AMDTRLAANF HVPPASLQAI
401: PYIMLIVLVP AYEAVFVPAV RRLTGVGTGI TPLQRIGVGL FAVTFSMVAA ALVEARRRHS SVSGDGRALS IFWIAPQFLV FGLSEMFTAV GLIEFFYKQS
501: LSGMQAFLTS MTYCSYSFGF YLSSVLVSLV NRVTSRNGGN GWLSNNDLDK DRLDLFYWLL AALSVLNFFN FLFWSRWYSN SVETVQVAGV GGDGGSSEQE
601: DEKGSA
Best Arabidopsis Sequence Match ( AT1G59740.1 )
(BLAST)
001: MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I
Arabidopsis Description
NPF4.3Protein NRT1/ PTR FAMILY 4.3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.