Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G307400.1 | Wheat | plasma membrane | 98.62 | 98.28 |
| TraesCS2B01G326200.1 | Wheat | plasma membrane | 97.76 | 97.76 |
| EES12219 | Sorghum | plasma membrane | 84.83 | 83.53 |
| Zm00001d003603_P001 | Maize | plasma membrane | 84.31 | 82.88 |
| Os04t0441800-01 | Rice | plasma membrane | 86.9 | 82.49 |
| TraesCS4A01G225400.1 | Wheat | golgi, peroxisome, plasma membrane, plastid | 69.66 | 66.67 |
| KRH51284 | Soybean | plasma membrane | 62.41 | 63.84 |
| KRH01875 | Soybean | plasma membrane | 58.79 | 63.27 |
| CDY70795 | Canola | plasma membrane | 33.97 | 62.34 |
| PGSC0003DMT400053373 | Potato | cytosol, peroxisome, plasma membrane | 64.83 | 62.15 |
| AT1G59740.1 | Thale cress | plasma membrane | 63.1 | 61.93 |
| Solyc01g103030.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 64.48 | 61.72 |
| KRH26263 | Soybean | cytosol, peroxisome, plasma membrane | 65.0 | 61.6 |
| VIT_12s0035g01820.t01 | Wine grape | golgi, peroxisome, plasma membrane | 64.31 | 61.15 |
| Bra035429.1-P | Field mustard | plasma membrane | 62.59 | 61.11 |
| Bra027836.1-P | Field mustard | plasma membrane | 63.28 | 60.86 |
| CDY45893 | Canola | golgi, peroxisome, plasma membrane | 48.1 | 58.49 |
| CDY67653 | Canola | peroxisome | 36.21 | 57.85 |
| CDY65523 | Canola | plastid | 31.9 | 57.1 |
| CDY45147 | Canola | mitochondrion | 31.72 | 55.42 |
| HORVU2Hr1G076880.23 | Barley | golgi, peroxisome | 53.62 | 52.98 |
| TraesCS7A01G365100.1 | Wheat | plasma membrane | 38.45 | 37.99 |
| TraesCS3A01G272600.1 | Wheat | plasma membrane | 34.66 | 37.71 |
| TraesCS5A01G056100.1 | Wheat | plasma membrane | 29.48 | 36.0 |
| TraesCS5A01G409600.1 | Wheat | plasma membrane | 36.55 | 35.69 |
| TraesCS2A01G350100.1 | Wheat | plasma membrane | 34.31 | 35.6 |
| TraesCS2A01G350300.1 | Wheat | plasma membrane | 32.59 | 35.59 |
| TraesCS2A01G264500.1 | Wheat | plasma membrane | 35.17 | 35.23 |
| TraesCS1A01G031300.1 | Wheat | peroxisome | 35.0 | 34.88 |
| TraesCS5A01G388000.1 | Wheat | plasma membrane | 35.0 | 34.88 |
| TraesCS5A01G056200.2 | Wheat | plasma membrane | 33.79 | 34.88 |
| TraesCS7A01G301700.1 | Wheat | plasma membrane | 35.86 | 34.49 |
| TraesCS5A01G537100.1 | Wheat | peroxisome | 35.69 | 33.99 |
| TraesCS1A01G210900.1 | Wheat | plasma membrane | 28.28 | 33.95 |
| TraesCS1A01G211000.1 | Wheat | cytosol | 34.83 | 33.95 |
| TraesCS2A01G335800.1 | Wheat | mitochondrion | 35.0 | 33.55 |
| TraesCS2A01G350000.1 | Wheat | plasma membrane | 27.41 | 29.39 |
| TraesCS3A01G081100.3 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 30.86 | 28.46 |
Protein Annotations
| MapMan:24.2.2.9 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009624 | GO:GO:0016020 |
| GO:GO:0022857 | GO:GO:0055085 | InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam | PANTHER:PTHR11654 |
| PANTHER:PTHR11654:SF114 | SUPFAM:SSF103473 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2A01G309100 | EnsemblPlants:TraesCS2A01G309100.1 | SEG:seg |
Description
No Description!
Coordinates
chr2A:-:532085845..532089718
Molecular Weight (calculated)
62237.5 Da
IEP (calculated)
8.073
GRAVY (calculated)
0.389
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVESSAAHE VSVDWRGRPC EPGRHGGMRA AVFVLGIQAF EIMAIAAVGN NLITYVFGEM HFPLSEAANV VTNFVGTIFL LSLLGGFLSD SYLGCFWTML
101: TFGFVELSGF ILLSVQAHLP QLKPPPCNMA SMDGSCEQAR GFKSSIFFVA LYLVALGSGC LKPNMIAHGG DQFSGSDNAK SLSTYFNSAY FSFCLGELVA
201: LTALVWVQTH SGMDVGFGIS AAAMAAGLIS LVSGAAFYRN KPPQGSIFTP IARVFVAAFT KRKQICPTNT GNAGVGEPAR LAGSFRHGNK FRFLDKACVR
301: DAAQQQGGNT KPESPWRLCT VSEVQQAKTL LAVTPIFACT IVFNTVLAQL QTFSVQQGSA MDTVLGGAFR VPPASLQAIP YAMLLLLVPA YELLLVPFMK
401: RLTGTRSGIT PLQRIGVGLG TVAFSMVAAA TVERRRRDLS ASGGRMSVLW IVPQFLVFGV SEMFTAVGLI EFFYKQACAG MQSFLTALTY CSYAFGFYLS
501: SVLVTTVNRV TARHGGAGGW LGDNDLDKDR LDLFYWMLAA LSVLNFFCYL VCARWYNSGA DGSDAASAQI AAEGDAKEIS
101: TFGFVELSGF ILLSVQAHLP QLKPPPCNMA SMDGSCEQAR GFKSSIFFVA LYLVALGSGC LKPNMIAHGG DQFSGSDNAK SLSTYFNSAY FSFCLGELVA
201: LTALVWVQTH SGMDVGFGIS AAAMAAGLIS LVSGAAFYRN KPPQGSIFTP IARVFVAAFT KRKQICPTNT GNAGVGEPAR LAGSFRHGNK FRFLDKACVR
301: DAAQQQGGNT KPESPWRLCT VSEVQQAKTL LAVTPIFACT IVFNTVLAQL QTFSVQQGSA MDTVLGGAFR VPPASLQAIP YAMLLLLVPA YELLLVPFMK
401: RLTGTRSGIT PLQRIGVGLG TVAFSMVAAA TVERRRRDLS ASGGRMSVLW IVPQFLVFGV SEMFTAVGLI EFFYKQACAG MQSFLTALTY CSYAFGFYLS
501: SVLVTTVNRV TARHGGAGGW LGDNDLDKDR LDLFYWMLAA LSVLNFFCYL VCARWYNSGA DGSDAASAQI AAEGDAKEIS
001: MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I
Arabidopsis Description
NPF4.3Protein NRT1/ PTR FAMILY 4.3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.