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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70795 Canola plasma membrane 69.97 80.38
Bra035429.1-P Field mustard plasma membrane 92.01 56.23
AT1G59740.1 Thale cress plasma membrane 83.47 51.27
CDY45893 Canola golgi, peroxisome, plasma membrane 60.06 45.7
CDY40277 Canola plasma membrane 28.37 40.39
KRH01875 Soybean plasma membrane 59.5 40.07
KRH51284 Soybean plasma membrane 62.53 40.04
PGSC0003DMT400053373 Potato cytosol, peroxisome, plasma membrane 65.84 39.5
Solyc01g103030.2.1 Tomato cytosol, peroxisome, plasma membrane 65.29 39.11
VIT_12s0035g01820.t01 Wine grape golgi, peroxisome, plasma membrane 65.29 38.85
KRH26263 Soybean cytosol, peroxisome, plasma membrane 64.74 38.4
TraesCS2D01G307400.1 Wheat plasma membrane 58.13 36.25
TraesCS2A01G309100.1 Wheat plasma membrane 57.85 36.21
TraesCS2B01G326200.1 Wheat plasma membrane 57.85 36.21
CDX93764 Canola plasma membrane 58.13 35.17
Os04t0441800-01 Rice plasma membrane 57.85 34.37
CDY50182 Canola plasma membrane 55.65 34.35
EES12219 Sorghum plasma membrane 55.65 34.3
Zm00001d003603_P001 Maize plasma membrane 55.1 33.9
HORVU2Hr1G076880.23 Barley golgi, peroxisome 53.44 33.05
CDY69100 Canola plasma membrane 29.2 31.93
CDY30051 Canola cytosol, peroxisome, plasma membrane 29.48 30.66
KXG24751 Sorghum peroxisome, plasma membrane, vacuole 48.21 29.07
Zm00001d049349_P001 Maize mitochondrion 46.83 23.71
CDY44319 Canola plasma membrane 28.1 21.66
CDY38629 Canola plasma membrane 28.1 21.29
CDY40278 Canola plasma membrane 33.88 21.06
CDY28437 Canola plasma membrane 33.88 21.06
CDY11649 Canola cytosol, peroxisome, plasma membrane 32.78 20.0
CDY26539 Canola plasma membrane 31.41 19.86
CDY15967 Canola plasma membrane 31.41 19.86
CDY31242 Canola plasma membrane 31.41 19.83
CDY21035 Canola plasma membrane 31.41 19.83
CDY52286 Canola plasma membrane 28.1 19.77
CDY04575 Canola plasma membrane 28.1 19.69
CDY52284 Canola plasma membrane 27.82 19.61
CDY15763 Canola plasma membrane 25.9 19.22
CDX84348 Canola plasma membrane 29.2 18.79
CDY00323 Canola plasma membrane 28.93 18.62
CDY45207 Canola golgi, plasma membrane 30.03 18.57
CDX71495 Canola plasma membrane 30.3 18.33
CDY38765 Canola plasma membrane 32.78 18.31
CDY30787 Canola mitochondrion 30.3 18.3
CDY15100 Canola plasma membrane 27.55 17.12
CDX91126 Canola plastid 28.1 16.4
CDY65523 Canola plastid 14.6 16.36
CDX85654 Canola cytosol, plasma membrane, plastid 27.82 16.24
CDY45147 Canola mitochondrion 14.6 15.96
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078JJA3UniProt:A0A078JJA3EnsemblPlants:CDY67653ProteinID:CDY67653
ProteinID:CDY67653.1ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006857GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00065273001InterPro:IPR020846InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_fam
ScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF187InterPro:PTR2_symporter_CSSUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EDE049:::::
Description
BnaAnng24930DBnaAnng24930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJA3]
Coordinates
chrLK036352:-:5169..9019
Molecular Weight (calculated)
40235.0 Da
IEP (calculated)
9.732
GRAVY (calculated)
0.219
Length
363 amino acids
Sequence
(BLAST)
001: MEKGNKESKK WAQEEVSNEI NNRELAEEES VDWRGRPSNP SKHGGMRAAL FVLGLQAFEI MGIAAVGNNL ITYVINEMHF PLSKAANSVT NFVGTIFIFS
101: LLGGYLSDAF LGSFWTILIF GFVELSGFIL LSVQAHLSQL KPPKCNPLIN QSSCEEAKGF KAIIFFTALY LVALGSGCVK PNMIAHGADQ FSHQSHPKQS
201: KRLSSYFNAA YLAFSIGELI ALSLLVWIQT HSGMDVGFGV SAAAMTMGLI SLVSGTMYFR NKRPRRSIFT PIAQVVVAAI LKTKLASPSD PKMLNGGHRV
301: ANDVVDSSTL PYTPRLRSYI ELTISIFVSE IFNFNKKTLA VCYTFVLLHV FFFQIKPQRF WFT
Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.