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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45147 Canola mitochondrion 96.91 94.58
CDY45893 Canola golgi, peroxisome, plasma membrane 83.95 57.02
Bra027836.1-P Field mustard plasma membrane 96.6 51.91
AT1G59740.1 Thale cress plasma membrane 89.2 48.9
KRH51284 Soybean plasma membrane 66.98 38.27
Solyc01g103030.2.1 Tomato cytosol, peroxisome, plasma membrane 70.37 37.62
PGSC0003DMT400053373 Potato cytosol, peroxisome, plasma membrane 70.06 37.52
KRH01875 Soybean plasma membrane 61.11 36.73
KRH26263 Soybean cytosol, peroxisome, plasma membrane 68.83 36.44
VIT_12s0035g01820.t01 Wine grape golgi, peroxisome, plasma membrane 68.52 36.39
CDY50182 Canola plasma membrane 64.81 35.71
CDX93764 Canola plasma membrane 65.43 35.33
TraesCS2B01G326200.1 Wheat plasma membrane 58.02 32.41
TraesCS2D01G307400.1 Wheat plasma membrane 57.41 31.96
TraesCS2A01G309100.1 Wheat plasma membrane 57.1 31.9
EES12219 Sorghum plasma membrane 57.41 31.58
Zm00001d003603_P001 Maize plasma membrane 57.1 31.36
Os04t0441800-01 Rice plasma membrane 58.02 30.77
KXG24751 Sorghum peroxisome, plasma membrane, vacuole 56.48 30.4
Zm00001d049349_P001 Maize mitochondrion 55.56 25.1
CDY15763 Canola plasma membrane 32.41 21.47
CDY11649 Canola cytosol, peroxisome, plasma membrane 38.27 20.84
CDX84348 Canola plasma membrane 35.8 20.57
CDY04575 Canola plasma membrane 32.72 20.46
CDY52286 Canola plasma membrane 32.41 20.35
CDY00323 Canola plasma membrane 35.19 20.21
CDY40278 Canola plasma membrane 36.11 20.03
CDY45207 Canola golgi, plasma membrane 36.11 19.93
CDY28437 Canola plasma membrane 35.49 19.69
CDX71495 Canola plasma membrane 36.42 19.67
CDY30787 Canola mitochondrion 36.42 19.63
CDY52284 Canola plasma membrane 31.17 19.61
CDY31242 Canola plasma membrane 33.95 19.13
CDY38765 Canola plasma membrane 38.27 19.08
CDY26539 Canola plasma membrane 33.64 18.99
CDY21035 Canola plasma membrane 33.64 18.96
CDY15967 Canola plasma membrane 33.33 18.82
CDY15100 Canola plasma membrane 31.17 17.29
CDX91126 Canola plastid 32.1 16.72
CDX85654 Canola cytosol, plasma membrane, plastid 32.1 16.72
CDY44319 Canola plasma membrane 21.3 14.65
CDY67653 Canola peroxisome 16.36 14.6
CDY38629 Canola plasma membrane 21.3 14.4
CDY30051 Canola cytosol, peroxisome, plasma membrane 10.19 9.46
HORVU2Hr1G076880.23 Barley golgi, peroxisome 15.12 8.35
CDY69100 Canola plasma membrane 6.79 6.63
CDY70795 Canola plasma membrane 4.32 4.43
CDY40277 Canola plasma membrane 0.62 0.78
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078JD32UniProt:A0A078JD32EnsemblPlants:CDY65523ProteinID:CDY65523
ProteinID:CDY65523.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00046756001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF187SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EF4C4BSEG:seg::::
Description
BnaCnng47430DBnaCnng47430D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JD32]
Coordinates
chrLK034825:+:413..1905
Molecular Weight (calculated)
36185.1 Da
IEP (calculated)
10.038
GRAVY (calculated)
0.285
Length
324 amino acids
Sequence
(BLAST)
001: VPSQVVVAAI SKRKLVAPSD PIMLHGGNHA SNDVVPSSTL PHTPRLRFLD KACIKVQETN TKESPWTLCT VSQVEQVKTL ISLVPIFAST IVFNTILAQL
101: QTFSVQQGSS MNTRLSNSVR IPPASLQAIP YIMLIFLVPL YDSLFVPFAR KFTGQKSGIT PLTRIGFGLF LSTFSMVSAA LLEKKRRDSS VLDGRILSIF
201: WITPQFLIFG VSEMFTAVGL IEFFYKQSAK GMESFLMAFT YCSYSFGFYF SSVLVSIVNK ITSTSVNSKG WLGDNDLNKD RLDLFYWLLA VLSLLNFLSY
301: LFWSRWNIKS SRSNNSNVVG DDNI
Best Arabidopsis Sequence Match ( AT1G59740.1 )
(BLAST)
001: MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I
Arabidopsis Description
NPF4.3Protein NRT1/ PTR FAMILY 4.3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.