Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04575 | Canola | plasma membrane | 96.32 | 90.93 |
| AT3G25280.1 | Thale cress | plasma membrane | 74.44 | 69.87 |
| CDY52286 | Canola | plasma membrane | 64.21 | 60.85 |
| CDY52284 | Canola | plasma membrane | 63.8 | 60.58 |
| CDY15100 | Canola | plasma membrane | 61.76 | 51.71 |
| CDY40277 | Canola | plasma membrane | 20.04 | 38.43 |
| CDY40278 | Canola | plasma membrane | 42.54 | 35.62 |
| CDY28437 | Canola | plasma membrane | 42.33 | 35.45 |
| CDY00323 | Canola | plasma membrane | 39.26 | 34.04 |
| CDX84348 | Canola | plasma membrane | 39.06 | 33.87 |
| CDY11649 | Canola | cytosol, peroxisome, plasma membrane | 40.9 | 33.61 |
| CDY65523 | Canola | plastid | 21.47 | 32.41 |
| CDY45147 | Canola | mitochondrion | 21.88 | 32.23 |
| CDY69100 | Canola | plasma membrane | 21.27 | 31.33 |
| CDY31242 | Canola | plasma membrane | 36.81 | 31.3 |
| CDY21035 | Canola | plasma membrane | 36.61 | 31.13 |
| CDY30051 | Canola | cytosol, peroxisome, plasma membrane | 22.09 | 30.95 |
| CDY38765 | Canola | plasma membrane | 40.9 | 30.77 |
| CDY15967 | Canola | plasma membrane | 35.79 | 30.49 |
| CDY26539 | Canola | plasma membrane | 35.58 | 30.31 |
| CDY50182 | Canola | plasma membrane | 35.99 | 29.93 |
| CDX93764 | Canola | plasma membrane | 36.61 | 29.83 |
| CDY45893 | Canola | golgi, peroxisome, plasma membrane | 28.83 | 29.56 |
| CDY45207 | Canola | golgi, plasma membrane | 33.33 | 27.77 |
| CDY30787 | Canola | mitochondrion | 33.74 | 27.45 |
| CDX71495 | Canola | plasma membrane | 33.54 | 27.33 |
| CDY70795 | Canola | plasma membrane | 17.38 | 26.9 |
| CDY44319 | Canola | plasma membrane | 25.15 | 26.11 |
| CDY67653 | Canola | peroxisome | 19.22 | 25.9 |
| CDY38629 | Canola | plasma membrane | 25.15 | 25.68 |
| CDX91126 | Canola | plastid | 29.86 | 23.47 |
| CDX85654 | Canola | cytosol, plasma membrane, plastid | 29.86 | 23.47 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:11.1.4.1 | MapMan:24.2.2.9 | GO:A0A078FTT5 | UniProt:A0A078FTT5 | EnsemblPlants:CDY15763 |
| ProteinID:CDY15763 | ProteinID:CDY15763.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00090017001 |
| InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam | PFscan:PS51257 | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF165 |
| SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0004EE13F4 | SEG:seg | : | : |
Description
BnaC04g15610DBnaC04g15610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTT5]
Coordinates
chrLK032057:-:387381..389211
Molecular Weight (calculated)
54107.3 Da
IEP (calculated)
6.656
GRAVY (calculated)
0.444
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNEIEERFE DWKGREAIPG KHGGIGPASI ACATAANMVT NFMGTTFLLT LLGGFIADSF LTNFTTFIIF CCLELMGLIL LTFQSYSPKL QPESDKTPST
101: LQATILFTGL YAMAFGAGGI KASLPTHGGD QLDRGNPRLI SRFFNWFYFS ICCGSILAVT IVVSIEESKG WFWSFTISAG TLALALLIFM AGLPFYRFKS
201: PTGSSLTRIT KVIVSAARNR NKSDLDEEMM QSLTSTDEGI SHTKLKCLDK AMLNKNISAI EVAETRTFLG LLLIFFSTIA MNCCLAQLST FSVQQGMIMD
301: RKLFGSFEIP VPSLVVIPLL LVILSIPLYD YFGKGISSDI SPSFNLNRIR LGLALSSFSM VVAAIVETTR KYVAVHYDFK ISVLWLMVQY LMLTVADTLA
401: FGGMLDFFYR EAPSNMKSMS TALGWCSAAF GFFLSTALVE ITNTITGWLG HQWLGGEDLN ETSLELFYVV LFVLNTLNLL NYNFWTKGY
101: LQATILFTGL YAMAFGAGGI KASLPTHGGD QLDRGNPRLI SRFFNWFYFS ICCGSILAVT IVVSIEESKG WFWSFTISAG TLALALLIFM AGLPFYRFKS
201: PTGSSLTRIT KVIVSAARNR NKSDLDEEMM QSLTSTDEGI SHTKLKCLDK AMLNKNISAI EVAETRTFLG LLLIFFSTIA MNCCLAQLST FSVQQGMIMD
301: RKLFGSFEIP VPSLVVIPLL LVILSIPLYD YFGKGISSDI SPSFNLNRIR LGLALSSFSM VVAAIVETTR KYVAVHYDFK ISVLWLMVQY LMLTVADTLA
401: FGGMLDFFYR EAPSNMKSMS TALGWCSAAF GFFLSTALVE ITNTITGWLG HQWLGGEDLN ETSLELFYVV LFVLNTLNLL NYNFWTKGY
001: MENDMEEKFE DWKGKEAIPG KHGGIRAASI VCVVVMMENI VFIANGFNFV KYFMGSMHYT PATAANMVTN FMGTSFLLTL FGGFIADSFV THFTTFIVFC
101: CIELMGLILL TFQAHNPKLL PEKDKTPSTL QSAILFTGLY AMAIGTGGLK ASLPSHGGDQ IDRRNPRLIS RFFDWLYFSI CSGCLLAVTV VLWIEEKKGW
201: IWSFNISVGI LATALCIFTV GLPFYRFKRP NGSPLKKIAI VIISAARNRN KSDLDEEMMR GLISIYKNNS HNKLKWIDKA TLNKNISETE VEETRTFLGL
301: LPIFGSTIVM SCCVAQLSTF SAQQGMLMNK KLFHSFEIPV PSLTAIPLIF MLLSIPLYEF FGKKISSGNN NRSSSFNLKR IGLGLALSSV SMAVSAIVEA
401: KRKHEVVHNN FRISVLWLVF QYLMLSVSDM LTLGGMLEFF YREAPSNMKS ISTALGWCST ALGFFLSTTL VEVTNAVTGR LGHQWLGGED LNKTRLELFY
501: VLLCVLNTLN LLNYIFWAKR Y
101: CIELMGLILL TFQAHNPKLL PEKDKTPSTL QSAILFTGLY AMAIGTGGLK ASLPSHGGDQ IDRRNPRLIS RFFDWLYFSI CSGCLLAVTV VLWIEEKKGW
201: IWSFNISVGI LATALCIFTV GLPFYRFKRP NGSPLKKIAI VIISAARNRN KSDLDEEMMR GLISIYKNNS HNKLKWIDKA TLNKNISETE VEETRTFLGL
301: LPIFGSTIVM SCCVAQLSTF SAQQGMLMNK KLFHSFEIPV PSLTAIPLIF MLLSIPLYEF FGKKISSGNN NRSSSFNLKR IGLGLALSSV SMAVSAIVEA
401: KRKHEVVHNN FRISVLWLVF QYLMLSVSDM LTLGGMLEFF YREAPSNMKS ISTALGWCST ALGFFLSTTL VEVTNAVTGR LGHQWLGGED LNKTRLELFY
501: VLLCVLNTLN LLNYIFWAKR Y
Arabidopsis Description
NPF4.2Protein NRT1/ PTR FAMILY 4.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSE8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.