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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • cytosol 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:cytosol, golgi, plasma membrane
BaCelLo:cytosol
MultiLoc:golgi
PProwler:secretory
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012052.1-P Field mustard plasma membrane 88.76 100.0
CDX71495 Canola plasma membrane 98.98 96.83
CDY30787 Canola mitochondrion 97.61 95.34
AT2G26690.1 Thale cress plasma membrane 89.95 91.51
Solyc07g032490.2.1 Tomato plasma membrane 73.25 75.57
PGSC0003DMT400075163 Potato plasma membrane 74.28 75.17
KRH20280 Soybean plasma membrane 73.76 74.53
VIT_11s0016g05170.t01 Wine grape plasma membrane 72.4 73.78
Solyc01g096880.2.1 Tomato plasma membrane 72.06 73.69
KRH03705 Soybean plasma membrane 73.25 73.5
PGSC0003DMT400070732 Potato plasma membrane 71.38 72.87
GSMUA_Achr6P05170_001 Banana plasma membrane 64.91 65.8
TraesCS1D01G032700.1 Wheat peroxisome 63.2 63.75
TraesCS1B01G038700.1 Wheat peroxisome 63.2 63.75
TraesCS1A01G031300.1 Wheat peroxisome 63.03 63.57
HORVU1Hr1G004720.4 Barley plasma membrane 62.18 63.26
Zm00001d044529_P001 Maize cytosol, peroxisome, plasma membrane 63.37 62.94
KXG32694 Sorghum cytosol 62.35 62.35
Zm00001d009399_P001 Maize cytosol, peroxisome, plasma membrane 62.18 61.76
GSMUA_Achr7P08300_001 Banana plasma membrane 68.48 59.73
GSMUA_Achr4P30700_001 Banana plasma membrane 65.59 56.04
CDY30051 Canola cytosol, peroxisome, plasma membrane 32.54 54.73
CDY31242 Canola plasma membrane 50.77 51.83
CDY21035 Canola plasma membrane 50.77 51.83
CDY69100 Canola plasma membrane 29.13 51.51
CDY26539 Canola plasma membrane 50.26 51.39
CDY15967 Canola plasma membrane 50.09 51.22
CDY44319 Canola plasma membrane 36.63 45.65
CDY38629 Canola plasma membrane 36.63 44.89
CDY40277 Canola plasma membrane 17.04 39.22
CDY40278 Canola plasma membrane 36.12 36.3
CDY65523 Canola plastid 19.93 36.11
CDY28437 Canola plasma membrane 35.78 35.96
CDY50182 Canola plasma membrane 35.6 35.54
CDX93764 Canola plasma membrane 36.29 35.5
CDY11649 Canola cytosol, peroxisome, plasma membrane 35.95 35.46
CDY45147 Canola mitochondrion 19.93 35.24
CDY52284 Canola plasma membrane 30.15 34.37
CDY00323 Canola plasma membrane 32.88 34.22
CDX84348 Canola plasma membrane 32.71 34.04
CDY52286 Canola plasma membrane 29.64 33.72
CDY04575 Canola plasma membrane 29.64 33.59
CDY15763 Canola plasma membrane 27.77 33.33
CDY45893 Canola golgi, peroxisome, plasma membrane 26.92 33.12
CDX85654 Canola cytosol, plasma membrane, plastid 35.09 33.12
CDX91126 Canola plastid 34.92 32.96
CDY70795 Canola plasma membrane 17.72 32.91
CDY38765 Canola plasma membrane 35.78 32.31
CDY15100 Canola plasma membrane 30.32 30.48
CDY67653 Canola peroxisome 18.57 30.03
Protein Annotations
MapMan:24.2.2.9GO:A0A078I567UniProt:A0A078I567EnsemblPlants:CDY45207ProteinID:CDY45207ProteinID:CDY45207.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006857GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00081637001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF85InterPro:PTR2_symporter_CS
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EEF9DESEG:seg::
Description
BnaA07g12830DBnaA07g12830D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078I567]
Coordinates
chrLK032618:+:1576..7433
Molecular Weight (calculated)
64703.4 Da
IEP (calculated)
9.268
GRAVY (calculated)
0.351
Length
587 amino acids
Sequence
(BLAST)
001: YSHQGITRRK MESKGSWTVA DAVDYNGLPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSNSANI VTDFMGTSFL LCLLGGFLAD
101: SFLGRFKTIA IFSTIQALGT GALAVATKLP ELRPPTCHHG EACTPATAFQ MTFLYIALYL IALGTGGLKS SISGFGSDQF DDKDPKEKAQ MAFFFNRFFF
201: IISMGTLMAV TVLVYIQDEV GRSWAYGICT VSMAIAIAVF LSGTKSYRYK KSQGSPVVQI FQIIAASIRK RKTELPQSIV YLYEDTPEGL RIEHTDQFRM
301: LDKAAVVTEG DFEQTLDGIA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNVGNFQIP AGSLTVFFVA AILITLAFYD
401: RVIMPFWKKW KGKPGFSSLQ LMAIGLVLST IGMAAAAIVE QKRLSVAKSS TQKTLPISVF LLVPQFFLVG SGEAFIYTGQ LDFFITQSPK GMKTMSTGLF
501: LTTLSLGFFV SSFLVSIVKK VTATSVNGGW LADNINHGRL DLFYWLLVIL SGINFVVYVI CALWFKPTKS KDSEEMEKGK GFSVEDC
Best Arabidopsis Sequence Match ( AT2G26690.1 )
(BLAST)
001: MESKGSWTVA DAVDYKGRPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSTSANI VTDFMGTSFL LCLLGGFLAD SFLGRFKTIG
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC
Arabidopsis Description
NPF6.2Protein NRT1/ PTR FAMILY 6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.