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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:secretory
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY65523 Canola plastid 94.58 96.91
CDY45893 Canola golgi, peroxisome, plasma membrane 82.53 57.44
Bra027836.1-P Field mustard plasma membrane 96.39 53.07
AT1G59740.1 Thale cress plasma membrane 87.35 49.07
KRH51284 Soybean plasma membrane 65.36 38.27
Solyc01g103030.2.1 Tomato cytosol, peroxisome, plasma membrane 69.28 37.95
PGSC0003DMT400053373 Potato cytosol, peroxisome, plasma membrane 68.98 37.85
KRH01875 Soybean plasma membrane 59.64 36.73
KRH26263 Soybean cytosol, peroxisome, plasma membrane 67.17 36.44
VIT_12s0035g01820.t01 Wine grape golgi, peroxisome, plasma membrane 66.87 36.39
CDY50182 Canola plasma membrane 63.55 35.88
CDX93764 Canola plasma membrane 64.16 35.5
TraesCS2B01G326200.1 Wheat plasma membrane 56.33 32.24
TraesCS2D01G307400.1 Wheat plasma membrane 55.72 31.79
TraesCS2A01G309100.1 Wheat plasma membrane 55.42 31.72
EES12219 Sorghum plasma membrane 55.42 31.24
Zm00001d003603_P001 Maize plasma membrane 55.12 31.02
Os04t0441800-01 Rice plasma membrane 56.63 30.77
KXG24751 Sorghum peroxisome, plasma membrane, vacuole 53.92 29.73
Zm00001d049349_P001 Maize mitochondrion 53.31 24.69
CDY15763 Canola plasma membrane 32.23 21.88
CDY11649 Canola cytosol, peroxisome, plasma membrane 37.65 21.01
CDY04575 Canola plasma membrane 32.53 20.85
CDX84348 Canola plasma membrane 35.24 20.74
CDY52286 Canola plasma membrane 32.23 20.74
CDY00323 Canola plasma membrane 34.64 20.39
CDY40278 Canola plasma membrane 35.84 20.38
CDY28437 Canola plasma membrane 35.24 20.03
CDY52284 Canola plasma membrane 31.02 20.0
CDY45207 Canola golgi, plasma membrane 35.24 19.93
CDX71495 Canola plasma membrane 35.54 19.67
CDY30787 Canola mitochondrion 35.54 19.63
CDY31242 Canola plasma membrane 33.73 19.48
CDY26539 Canola plasma membrane 33.43 19.34
CDY21035 Canola plasma membrane 33.43 19.3
CDY38765 Canola plasma membrane 37.65 19.23
CDY15967 Canola plasma membrane 33.13 19.16
CDY15100 Canola plasma membrane 31.02 17.64
CDX91126 Canola plastid 31.93 17.04
CDX85654 Canola cytosol, plasma membrane, plastid 31.93 17.04
CDY44319 Canola plasma membrane 20.78 14.65
CDY67653 Canola peroxisome 15.96 14.6
CDY38629 Canola plasma membrane 20.78 14.4
CDY30051 Canola cytosol, peroxisome, plasma membrane 9.64 9.17
HORVU2Hr1G076880.23 Barley golgi, peroxisome 14.46 8.18
CDY69100 Canola plasma membrane 6.33 6.33
CDY70795 Canola plasma membrane 4.82 5.06
CDY40277 Canola plasma membrane 0.9 1.18
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078I532UniProt:A0A078I532EnsemblPlants:CDY45147ProteinID:CDY45147
ProteinID:CDY45147.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00081562001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF187SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EEBEA9SEG:seg::::
Description
BnaA09g14450DBnaA09g14450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I532]
Coordinates
chrLK032616:+:125145..126867
Molecular Weight (calculated)
37099.2 Da
IEP (calculated)
10.023
GRAVY (calculated)
0.265
Length
332 amino acids
Sequence
(BLAST)
001: MKREKLLGSA SQVVVAAISK RKLVAPSDPI MLHGGNHASN DVLPSSTLPH TPRLRFLDKA CIKVQETNTK ESPWTLCTVS QVEQVKTLIS LVPIFASTIV
101: FNTILAQLQT FSVQQGSSMN TRLSNSFHIP PASLQAIPYI MLIFLVPLYD SLFVPFARKF TGQDSGITPL TRIGFGLFLS TFSMVSAALL EKKRRDSSVL
201: DGRILSIFWI TPQFLIFGIS EMFTAVGLIE FFYKQSAKGM ESFLMALTYC SYSFGFYFSS VLVSIVNKIT STSVNSKGWL GDNDLNKDRL DLFYWLLAVL
301: SLLNFLSYLF WSRWNIKSSR SNNSTVVGND NI
Best Arabidopsis Sequence Match ( AT1G59740.1 )
(BLAST)
001: MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I
Arabidopsis Description
NPF4.3Protein NRT1/ PTR FAMILY 4.3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.