CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plastid 1
peroxisome 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20280	Soybean	plasma membrane	95.56	96.21
VIT_11s0016g05170.t01	Wine grape	plasma membrane	77.44	78.65
Solyc07g032490.2.1	Tomato	plasma membrane	74.02	76.1
PGSC0003DMT400075163	Potato	plasma membrane	75.38	76.03
AT2G26690.1	Thale cress	plasma membrane	74.36	75.39
Solyc01g096880.2.1	Tomato	plasma membrane	72.82	74.22
Bra012052.1-P	Field mustard	plasma membrane	65.98	74.09
PGSC0003DMT400070732	Potato	plasma membrane	72.31	73.57
CDY45207	Canola	golgi, plasma membrane	73.5	73.25
CDX71495	Canola	plasma membrane	73.85	72.0
CDY30787	Canola	mitochondrion	73.16	71.21
GSMUA_Achr6P05170_001	Banana	plasma membrane	68.21	68.91
TraesCS1A01G031300.1	Wheat	peroxisome	64.62	64.95
TraesCS1B01G038700.1	Wheat	peroxisome	64.27	64.6
HORVU1Hr1G004720.4	Barley	plasma membrane	63.59	64.47
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	64.79	64.13
TraesCS1D01G032700.1	Wheat	peroxisome	63.76	64.09
GSMUA_Achr7P08300_001	Banana	plasma membrane	73.5	63.89
KXG32694	Sorghum	cytosol	63.93	63.71
Zm00001d009399_P001	Maize	cytosol, peroxisome, plasma membrane	62.91	62.27
GSMUA_Achr4P30700_001	Banana	plasma membrane	71.79	61.14
KRH04097	Soybean	peroxisome	54.87	54.04
KRH77380	Soybean	cytosol, plasma membrane, plastid	54.02	53.92
KRH28055	Soybean	plasma membrane	53.85	53.75
KRH57369	Soybean	plasma membrane	51.28	50.85
KRH73378	Soybean	cytosol, peroxisome, plasma membrane	45.98	45.75
KRH14759	Soybean	plasma membrane	45.81	45.66
KRH51284	Soybean	plasma membrane	35.21	36.33
KRH51937	Soybean	plasma membrane	35.21	36.01
KRH42929	Soybean	plasma membrane	36.75	35.66
KRH59041	Soybean	plasma membrane	36.07	35.52
KRH69373	Soybean	plasma membrane	34.87	35.17
KRH03418	Soybean	plasma membrane	34.53	34.71
KRH01875	Soybean	plasma membrane	31.97	34.69
KRH74766	Soybean	plasma membrane	34.19	34.54
KRH45842	Soybean	plasma membrane	35.04	34.51
KRH45840	Soybean	plasma membrane	35.04	34.51
KRH61236	Soybean	plasma membrane	35.9	34.31
KRH56961	Soybean	plasma membrane	34.19	34.31
KRG99175	Soybean	plasma membrane	34.19	34.19
KRH11088	Soybean	plasma membrane	34.87	34.06
KRH26263	Soybean	cytosol, peroxisome, plasma membrane	35.56	33.99
KRH21158	Soybean	plasma membrane	34.19	33.61
KRH68384	Soybean	plasma membrane	33.33	33.51
KRG96656	Soybean	plasma membrane	32.65	33.16
KRH33721	Soybean	plasma membrane	33.5	32.45
KRG90426	Soybean	plasma membrane	33.33	32.45
KRH01794	Soybean	cytosol, peroxisome, plasma membrane	33.85	31.38
KRH02511	Soybean	plasma membrane	31.79	31.31
KRH19434	Soybean	plasma membrane	31.45	31.19

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100816561	MapMan:24.2.2.9	UniProt:A0A0R0FKZ4	EMBL:ACUP02010358	EnsemblPlantsGene:GLYMA_17G115300
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006857	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlants:KRH03705	ProteinID:KRH03705
ProteinID:KRH03705.1	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	ScanProsite:PS01022	PANTHER:PTHR11654
PANTHER:PTHR11654:SF85	InterPro:PTR2_symporter_CS	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0001890C14	SEG:seg

Description

hypothetical protein

Coordinates

chr17:-:9122203..9127019

Molecular Weight (calculated)

64275.9 Da

IEP (calculated)

9.590

GRAVY (calculated)

0.343

Length

585 amino acids

Sequence
(BLAST)

001: MKEKMSWTVA DAVDYKGFPA DRSKTGGWVP AALILGIEIV ERLSTMGIAV NLVTYMISIM HLPSSTAANT VTDFMGTSFL LCLLGGFLAD SFLGRYKTIG
101: IFASIQTLGT ATLAISTKLP GLRPPPCHAN SDSCKQANGF QMGILYLSLY LIALGTGGLK SSVSGFGSDQ FDEKDEKEKS QMAYFFNRFF FFISFGTLAA
201: VTVLVYLQDE VSRSLAYGIC SVSMIIAIIV FLSGTKRYRY KRSLGSPIVH IFQVIAASIK KRKMQLPYNV GSLYEDTPEA SRIEHTEQFR FLEKAAIVAE
301: DDFETNLCGS GPNPWKLCSL TRVEEVKMMV RLLPVWATTI IFWTIYAQLI TFSVEQASTM ERNIGSFQIP AGSVTVFFVA AILITLAVYD RLIMPLWKKW
401: NGKPGFTDLQ RIAIGLVFSI FGMAAASVCE RKRLSVAKSV SGGNQATTTL PISVFLLIPQ FFLVGSGEAF IYTGQLDFFI TRSPKGMKTM STGLFLTTLS
501: LGFFFSSFLV SVVKKVTGTR DGQGWLADSI NKGRLDLFYA LLTILSFVNF AAFAVCAVWF KPKKPKQPAA MQMGPVNGST AEEKC

Best Arabidopsis Sequence Match ( AT2G26690.1 )
(BLAST)

001: MESKGSWTVA DAVDYKGRPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSTSANI VTDFMGTSFL LCLLGGFLAD SFLGRFKTIG
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC

Arabidopsis Description

NPF6.2Protein NRT1/ PTR FAMILY 6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.