Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G12110.1 | KRH12829 | AT1G30270.1 | 19766570 |
AT1G12110.1 | KRH37794 | AT1G30270.1 | 19766570 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH04097 | Soybean | peroxisome | 91.19 | 90.57 |
KRH28055 | Soybean | plasma membrane | 68.64 | 69.11 |
KRH77380 | Soybean | cytosol, plasma membrane, plastid | 68.47 | 68.94 |
PGSC0003DMT400012226 | Potato | cytosol, peroxisome, plasma membrane | 66.44 | 66.44 |
Solyc08g078950.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 66.1 | 66.1 |
PGSC0003DMT400032493 | Potato | cytosol, peroxisome, plasma membrane | 64.75 | 64.75 |
Solyc08g007430.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 64.41 | 64.41 |
GSMUA_Achr8P11180_001 | Banana | peroxisome | 62.03 | 64.32 |
Os08t0155400-01 | Rice | plasma membrane | 57.12 | 64.19 |
VIT_02s0154g00260.t01 | Wine grape | plastid | 70.0 | 64.13 |
GSMUA_Achr8P11190_001 | Banana | peroxisome | 61.02 | 63.72 |
GSMUA_Achr11P... | Banana | plasma membrane | 60.68 | 63.14 |
Solyc06g060620.2.1 | Tomato | plasma membrane | 62.71 | 62.5 |
PGSC0003DMT400035882 | Potato | plasma membrane | 61.86 | 61.66 |
GSMUA_Achr1P20240_001 | Banana | plasma membrane | 61.86 | 61.55 |
TraesCS7D01G297000.1 | Wheat | plasma membrane | 62.54 | 61.19 |
TraesCS7A01G301700.1 | Wheat | plasma membrane | 62.37 | 61.03 |
TraesCS7B01G201900.1 | Wheat | plasma membrane | 62.37 | 61.03 |
EES13374 | Sorghum | plasma membrane | 62.03 | 60.9 |
GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 59.83 | 60.45 |
Zm00001d024587_P001 | Maize | plasma membrane | 62.03 | 60.2 |
HORVU7Hr1G071600.2 | Barley | mitochondrion | 62.54 | 59.42 |
GSMUA_Achr11P... | Banana | peroxisome | 56.27 | 58.97 |
Os10t0554200-02 | Rice | plasma membrane | 59.49 | 58.89 |
CDY30051 | Canola | cytosol, peroxisome, plasma membrane | 34.75 | 58.74 |
Zm00001d029932_P001 | Maize | plasma membrane | 59.15 | 58.66 |
Bra016789.1-P | Field mustard | plasma membrane | 58.64 | 58.64 |
CDY31242 | Canola | plasma membrane | 57.12 | 58.61 |
Zm00001d029933_P001 | Maize | cytosol, peroxisome, plasma membrane | 58.31 | 58.5 |
EER91957 | Sorghum | plasma membrane | 58.98 | 58.49 |
CDY21035 | Canola | plasma membrane | 56.95 | 58.43 |
TraesCS4D01G361500.1 | Wheat | peroxisome | 60.0 | 58.42 |
TraesCS4B01G375800.1 | Wheat | plasma membrane | 59.83 | 58.15 |
TraesCS1D01G214300.1 | Wheat | plasma membrane | 58.47 | 57.98 |
TraesCS5A01G537100.1 | Wheat | peroxisome | 59.83 | 57.96 |
TraesCS1B01G224900.1 | Wheat | plasma membrane | 58.47 | 57.89 |
TraesCS1D01G214200.1 | Wheat | plasma membrane | 58.47 | 57.89 |
OQU93471 | Sorghum | plasma membrane | 59.32 | 57.85 |
TraesCS1A01G211000.1 | Wheat | cytosol | 58.31 | 57.82 |
TraesCS1B01G225000.1 | Wheat | plasma membrane | 58.31 | 57.82 |
Zm00001d027285_P001 | Maize | cytosol, plasma membrane, vacuole | 58.64 | 57.67 |
TraesCS1A01G210900.1 | Wheat | plasma membrane | 47.12 | 57.56 |
Os03t0103000-01 | Rice | cytosol, peroxisome, plasma membrane | 57.46 | 57.56 |
Bra026991.1-P | Field mustard | plasma membrane | 57.46 | 57.56 |
TraesCS4B01G371000.1 | Wheat | peroxisome | 58.81 | 57.55 |
CDY26539 | Canola | plasma membrane | 55.93 | 57.49 |
CDY15967 | Canola | plasma membrane | 55.76 | 57.32 |
AT1G12110.1 | Thale cress | plasma membrane | 56.95 | 56.95 |
CDY69100 | Canola | plasma membrane | 31.86 | 56.63 |
GSMUA_Achr6P36750_001 | Banana | plasma membrane | 63.05 | 56.28 |
HORVU1Hr1G053990.4 | Barley | peroxisome | 58.81 | 56.24 |
HORVU4Hr1G088020.4 | Barley | nucleus, plasma membrane | 58.98 | 56.04 |
Bra019744.1-P | Field mustard | plasma membrane | 25.42 | 55.97 |
KRH20280 | Soybean | plasma membrane | 51.19 | 51.98 |
KRH03705 | Soybean | plasma membrane | 50.85 | 51.28 |
HORVU1Hr1G054020.3 | Barley | mitochondrion, peroxisome, plastid | 43.73 | 47.25 |
KRH14759 | Soybean | plasma membrane | 46.44 | 46.68 |
KRH73378 | Soybean | cytosol, peroxisome, plasma membrane | 46.44 | 46.6 |
KRH51284 | Soybean | plasma membrane | 35.76 | 37.21 |
KRH74766 | Soybean | plasma membrane | 35.59 | 36.27 |
KRH69373 | Soybean | plasma membrane | 35.42 | 36.03 |
KRH45840 | Soybean | plasma membrane | 35.42 | 35.19 |
KRH56961 | Soybean | plasma membrane | 34.75 | 35.16 |
KRH03418 | Soybean | plasma membrane | 34.58 | 35.05 |
KRH42929 | Soybean | plasma membrane | 35.76 | 34.99 |
KRH01875 | Soybean | plasma membrane | 31.86 | 34.88 |
KRG99175 | Soybean | plasma membrane | 34.41 | 34.7 |
KRH45842 | Soybean | plasma membrane | 34.92 | 34.68 |
KRH59041 | Soybean | plasma membrane | 34.58 | 34.34 |
KRH51937 | Soybean | plasma membrane | 32.03 | 33.04 |
KRH26263 | Soybean | cytosol, peroxisome, plasma membrane | 34.24 | 33.01 |
KRH11088 | Soybean | plasma membrane | 33.22 | 32.72 |
KRG96656 | Soybean | plasma membrane | 31.86 | 32.64 |
KRH21158 | Soybean | plasma membrane | 32.88 | 32.6 |
KRH68384 | Soybean | plasma membrane | 31.86 | 32.3 |
KRH61236 | Soybean | plasma membrane | 32.54 | 31.37 |
KRH33721 | Soybean | plasma membrane | 31.69 | 30.96 |
KRG90426 | Soybean | plasma membrane | 31.19 | 30.62 |
KRH19434 | Soybean | plasma membrane | 30.51 | 30.51 |
KRH02511 | Soybean | plasma membrane | 30.51 | 30.3 |
KRH01794 | Soybean | cytosol, peroxisome, plasma membrane | 32.2 | 30.11 |
Protein Annotations
Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | UniProt:A0A0R0JWX4 | EMBL:ACUP02002829 | EnsemblPlantsGene:GLYMA_05G056900 | GO:GO:0003674 |
GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | EnsemblPlants:KRH57369 | ProteinID:KRH57369 | ProteinID:KRH57369.1 |
InterPro:MFS_dom | InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF78 |
SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0006EDC2A9 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr5:-:5251115..5263100
Molecular Weight (calculated)
66114.1 Da
IEP (calculated)
9.151
GRAVY (calculated)
0.237
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTLPQTPGK TIPDACDYKG RPAERSKTGV EACERLTTMG VAVNLATYLT GTMHLGSANS ANTVTNFMGT SLMLCLFGGF VADTFIGRYL TIAIFATVQA
101: TSQCKDIFLT HCNCIATAFV ELYLYKICFH GVTILTISTI IPSLHPPKCI RDATRRCMSA NNMQLMVLYI ALYTTSLGIG GLKSSVSGFS TDQFDDSDKG
201: EKKQMLKFFN WFVFFISLGT LTAVTVLVYI QDHIGRYWGY GISVCAMLVA LLVLLSSTRR YRYKRLVGSP LTQIAMVFVA AWRKRHLELP SDSSLLFNLD
301: DVADESLRKN KQMLPHSKQF RFLDKAAIKD PKMDGEEITM QRNWYLSTLT DVEEVKMVQR ILPVWATTIM FWTVYAQMTT FSVQQATTMD RRIGNSFQIP
401: AASLTVFFVG SVLLTVPIYD RVITPIAQKI SHNPQGLTPL QRIGVGLVFS IFAMVSAALI EIKRLRMAQF FFVGSGEAFT YIGQLDFFLR ECPRGMKTMS
501: TGLFLSTLSL GFFLSSLLVT LVHKATRHRE PWLADNLNHG RLHHFYWLLA LLSGVNLVAY LFCAKGYVYK DKRLAEAGIE LEETDTACHA
101: TSQCKDIFLT HCNCIATAFV ELYLYKICFH GVTILTISTI IPSLHPPKCI RDATRRCMSA NNMQLMVLYI ALYTTSLGIG GLKSSVSGFS TDQFDDSDKG
201: EKKQMLKFFN WFVFFISLGT LTAVTVLVYI QDHIGRYWGY GISVCAMLVA LLVLLSSTRR YRYKRLVGSP LTQIAMVFVA AWRKRHLELP SDSSLLFNLD
301: DVADESLRKN KQMLPHSKQF RFLDKAAIKD PKMDGEEITM QRNWYLSTLT DVEEVKMVQR ILPVWATTIM FWTVYAQMTT FSVQQATTMD RRIGNSFQIP
401: AASLTVFFVG SVLLTVPIYD RVITPIAQKI SHNPQGLTPL QRIGVGLVFS IFAMVSAALI EIKRLRMAQF FFVGSGEAFT YIGQLDFFLR ECPRGMKTMS
501: TGLFLSTLSL GFFLSSLLVT LVHKATRHRE PWLADNLNHG RLHHFYWLLA LLSGVNLVAY LFCAKGYVYK DKRLAEAGIE LEETDTACHA
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.