Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G060350.5 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12110.1 | HORVU2Hr1G060350.5 | AT1G30270.1 | 19766570 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G201900.1 | Wheat | plasma membrane | 95.01 | 97.84 |
| TraesCS7D01G297000.1 | Wheat | plasma membrane | 94.85 | 97.68 |
| TraesCS7A01G301700.1 | Wheat | plasma membrane | 94.69 | 97.51 |
| Os08t0155400-01 | Rice | plasma membrane | 73.43 | 86.86 |
| EES13374 | Sorghum | plasma membrane | 83.74 | 86.52 |
| Zm00001d024587_P001 | Maize | plasma membrane | 82.77 | 84.54 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 68.92 | 73.29 |
| GSMUA_Achr1P20240_001 | Banana | plasma membrane | 68.12 | 71.33 |
| PGSC0003DMT400012226 | Potato | cytosol, peroxisome, plasma membrane | 64.57 | 67.97 |
| Solyc08g078950.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 64.25 | 67.63 |
| CDY30051 | Canola | cytosol, peroxisome, plasma membrane | 37.36 | 66.48 |
| KRH28055 | Soybean | plasma membrane | 62.32 | 66.04 |
| KRH04097 | Soybean | peroxisome | 63.12 | 65.99 |
| PGSC0003DMT400032493 | Potato | cytosol, peroxisome, plasma membrane | 62.64 | 65.93 |
| VIT_02s0154g00260.t01 | Wine grape | plastid | 68.28 | 65.84 |
| Solyc08g007430.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 62.32 | 65.59 |
| KRH77380 | Soybean | cytosol, plasma membrane, plastid | 61.84 | 65.53 |
| CDY69100 | Canola | plasma membrane | 34.94 | 65.36 |
| GSMUA_Achr6P36750_001 | Banana | plasma membrane | 69.57 | 65.36 |
| Bra019744.1-P | Field mustard | plasma membrane | 28.18 | 65.3 |
| HORVU4Hr1G088020.4 | Barley | nucleus, plasma membrane | 63.93 | 63.93 |
| HORVU1Hr1G053990.4 | Barley | peroxisome | 62.8 | 63.21 |
| Bra016789.1-P | Field mustard | plasma membrane | 59.58 | 62.71 |
| KRH57369 | Soybean | plasma membrane | 59.42 | 62.54 |
| CDY21035 | Canola | plasma membrane | 57.81 | 62.43 |
| CDY31242 | Canola | plasma membrane | 57.81 | 62.43 |
| Solyc06g060620.2.1 | Tomato | plasma membrane | 59.42 | 62.33 |
| AT1G12110.1 | Thale cress | plasma membrane | 58.94 | 62.03 |
| CDY15967 | Canola | plasma membrane | 57.17 | 61.85 |
| Bra026991.1-P | Field mustard | plasma membrane | 58.45 | 61.63 |
| PGSC0003DMT400035882 | Potato | plasma membrane | 58.62 | 61.49 |
| CDY26539 | Canola | plasma membrane | 56.52 | 61.15 |
| HORVU1Hr1G004720.4 | Barley | plasma membrane | 50.72 | 54.59 |
| HORVU1Hr1G054020.3 | Barley | mitochondrion, peroxisome, plastid | 44.93 | 51.1 |
| HORVU5Hr1G099170.6 | Barley | plasma membrane | 47.18 | 48.03 |
| HORVU2Hr1G065480.1 | Barley | golgi, plasma membrane | 17.39 | 48.0 |
| HORVU2Hr1G081050.1 | Barley | endoplasmic reticulum, extracellular | 4.51 | 40.58 |
| HORVU3Hr1G071510.1 | Barley | golgi, plasma membrane | 34.78 | 37.83 |
| HORVU7Hr1G086170.5 | Barley | cytosol, peroxisome, plastid | 37.04 | 36.45 |
| HORVU2Hr1G098210.2 | Barley | mitochondrion, plasma membrane | 17.71 | 35.83 |
| HORVU2Hr1G062730.7 | Barley | plasma membrane | 32.53 | 34.95 |
| HORVU4Hr1G015640.2 | Barley | golgi, peroxisome, plasma membrane | 33.17 | 34.16 |
| HORVU5Hr1G095020.1 | Barley | plasma membrane | 31.4 | 33.39 |
| HORVU2Hr1G085210.21 | Barley | plasma membrane | 29.47 | 32.62 |
| HORVU3Hr1G014510.3 | Barley | plastid | 33.66 | 32.06 |
| HORVU2Hr1G007730.1 | Barley | mitochondrion | 16.1 | 28.41 |
| HORVU2Hr1G085260.3 | Barley | plasma membrane | 19.32 | 23.39 |
| HORVU2Hr1G076880.23 | Barley | golgi, peroxisome | 21.9 | 23.17 |
Protein Annotations
| MapMan:24.2.2.9 | UniProt:A0A287WU05 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006857 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| EnsemblPlantsGene:HORVU7Hr1G071600 | EnsemblPlants:HORVU7Hr1G071600.2 | InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam | ScanProsite:PS01022 |
| PANTHER:PTHR11654 | PANTHER:PTHR11654:SF78 | InterPro:PTR2_symporter_CS | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI000B464198 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:395441147..395447433
Molecular Weight (calculated)
67149.9 Da
IEP (calculated)
9.895
GRAVY (calculated)
0.295
Length
621 amino acids
Sequence
(BLAST)
(BLAST)
001: PTPTPTRRYT GHRPTAARMV GLLPQTNAAA QAEVLGDAWD YRGRPAARST TGRWGAAAMI LVAELNERLT TLGIAVNLVT YLTATMHVGN AEAANVVTNF
101: MGTSFMLCLL GGFVADSFLG RYLTIAIFTA IQASGVTILT ISTAAPGLRP PACTAEGAGI GTCTRASGGQ LGVLYLALYL TALGTGGLKS SVSGFGSDQF
201: DESNSTEKSQ MMRFFNWFFF FISLGSLLAV TVLVYVQDNL GRPWGYGACA ASIAAGLVVF LAGTRRYRFK KLAGSPLTQI AAVVVAAWRK RRVQLPADTS
301: MLYDIDVGKV AAIEGGSTKK SKLKERIPHT KQFRFLDHAA INSDPAGEPT KWQLATLTDV EEVKTVARML PIWATTIMFW TVYAQMTTFS VSQATTMDRH
401: IGPSFQIPAG SLTVFFVGSI LLTVPIYDRI VVPVARRFNG NPHGLTPLQR IGIGLVLSIL AMTSAALVEI KRLRVARESA VPEGAPVPMT VFWLIPQFFF
501: VGAGEAFTYI GQLDFFLREC PKGMKTMSTG LFLSTLSLGF FVSSALVTVV HKITGDRRPW IADDLNKGEL YKFYWLLAGV CLANLVVYLF AARWYKYKAG
601: RPGADGSVNG VEMADAEPCL H
101: MGTSFMLCLL GGFVADSFLG RYLTIAIFTA IQASGVTILT ISTAAPGLRP PACTAEGAGI GTCTRASGGQ LGVLYLALYL TALGTGGLKS SVSGFGSDQF
201: DESNSTEKSQ MMRFFNWFFF FISLGSLLAV TVLVYVQDNL GRPWGYGACA ASIAAGLVVF LAGTRRYRFK KLAGSPLTQI AAVVVAAWRK RRVQLPADTS
301: MLYDIDVGKV AAIEGGSTKK SKLKERIPHT KQFRFLDHAA INSDPAGEPT KWQLATLTDV EEVKTVARML PIWATTIMFW TVYAQMTTFS VSQATTMDRH
401: IGPSFQIPAG SLTVFFVGSI LLTVPIYDRI VVPVARRFNG NPHGLTPLQR IGIGLVLSIL AMTSAALVEI KRLRVARESA VPEGAPVPMT VFWLIPQFFF
501: VGAGEAFTYI GQLDFFLREC PKGMKTMSTG LFLSTLSLGF FVSSALVTVV HKITGDRRPW IADDLNKGEL YKFYWLLAGV CLANLVVYLF AARWYKYKAG
601: RPGADGSVNG VEMADAEPCL H
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.