Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • peroxisome 1
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr4P23000_001
GSMUA_Achr4P31540_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12110.1 GSMUA_Achr4P23000_001 AT1G30270.1 19766570
AT1G12110.1 GSMUA_Achr4P31540_001 AT1G30270.1 19766570
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 76.39 77.57
GSMUA_Achr8P11190_001 Banana peroxisome 71.33 74.87
GSMUA_Achr11P... Banana plasma membrane 71.5 74.78
GSMUA_Achr6P36750_001 Banana plasma membrane 82.8 74.28
GSMUA_Achr8P11180_001 Banana peroxisome 71.16 74.17
GSMUA_Achr11P... Banana peroxisome 66.78 70.34
Os08t0155400-01 Rice plasma membrane 62.23 70.29
EES13374 Sorghum plasma membrane 71.16 70.22
TraesCS7D01G297000.1 Wheat plasma membrane 71.16 69.98
TraesCS7B01G201900.1 Wheat plasma membrane 70.99 69.82
TraesCS7A01G301700.1 Wheat plasma membrane 70.83 69.65
CDY30051 Canola cytosol, peroxisome, plasma membrane 40.64 69.05
HORVU7Hr1G071600.2 Barley mitochondrion 71.33 68.12
Zm00001d024587_P001 Maize plasma membrane 69.65 67.93
PGSC0003DMT400012226 Potato cytosol, peroxisome, plasma membrane 67.28 67.63
Bra019744.1-P Field mustard plasma membrane 30.52 67.54
Solyc08g078950.2.1 Tomato cytosol, peroxisome, plasma membrane 66.78 67.12
CDY69100 Canola plasma membrane 37.27 66.57
KRH04097 Soybean peroxisome 66.44 66.33
PGSC0003DMT400032493 Potato cytosol, peroxisome, plasma membrane 64.92 65.25
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 64.42 64.75
KRH28055 Soybean plasma membrane 63.91 64.68
VIT_02s0154g00260.t01 Wine grape plastid 69.98 64.44
KRH77380 Soybean cytosol, plasma membrane, plastid 63.41 64.16
CDY31242 Canola plasma membrane 60.37 62.26
CDY21035 Canola plasma membrane 60.37 62.26
Solyc06g060620.2.1 Tomato plasma membrane 62.06 62.16
KRH57369 Soybean plasma membrane 61.55 61.86
CDY15967 Canola plasma membrane 59.7 61.67
Bra016789.1-P Field mustard plasma membrane 61.05 61.36
CDY26539 Canola plasma membrane 59.36 61.32
PGSC0003DMT400035882 Potato plasma membrane 60.88 60.98
AT1G12110.1 Thale cress plasma membrane 60.54 60.85
Bra026991.1-P Field mustard plasma membrane 60.2 60.61
GSMUA_Achr6P05170_001 Banana plasma membrane 54.97 56.3
GSMUA_Achr3P05990_001 Banana cytosol, plasma membrane, plastid 49.24 50.87
GSMUA_Achr9P14440_001 Banana plasma membrane 17.2 50.25
GSMUA_Achr7P08300_001 Banana plasma membrane 55.48 48.89
GSMUA_Achr4P30700_001 Banana plasma membrane 53.63 46.29
GSMUA_Achr7P08880_001 Banana plasma membrane 35.08 37.61
GSMUA_Achr10P... Banana plasma membrane 33.56 35.28
GSMUA_Achr2P16840_001 Banana plasma membrane, plastid 35.58 34.99
GSMUA_Achr6P00820_001 Banana plasma membrane 36.59 34.34
GSMUA_Achr8P08410_001 Banana plasma membrane 33.9 34.13
GSMUA_Achr5P16920_001 Banana plasma membrane 31.87 33.93
GSMUA_Achr6P07370_001 Banana plasma membrane 31.7 33.57
GSMUA_Achr6P29080_001 Banana plasma membrane 32.38 32.54
GSMUA_Achr9P08330_001 Banana plasma membrane 32.04 32.53
GSMUA_AchrUn_... Banana plasma membrane 9.95 31.89
GSMUA_Achr9P01100_001 Banana cytosol, peroxisome, plasma membrane 31.7 31.6
GSMUA_Achr8P29280_001 Banana plasma membrane 30.19 28.1
GSMUA_Achr11P... Banana plasma membrane 27.32 24.51
Protein Annotations
MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006857
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr1G20240_001
EnsemblPlants:GSMUA_Achr1P20240_001EnsemblPlants:GSMUA_Achr1T20240_001UniProt:M0S1I2InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_fam
ScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF78InterPro:PTR2_symporter_CSSUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI000294C66ESEG:seg::::
Description
Nitrate transporter 1.1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G20240_001]
Coordinates
chr1:-:15174552..15176958
Molecular Weight (calculated)
64663.5 Da
IEP (calculated)
9.914
GRAVY (calculated)
0.374
Length
593 amino acids
Sequence
(BLAST)
001: MMGLPETDGP GEILSDAWDY KGRPAIRSRS GGWTSAAMIL GMLVELNERL TTLGIAVNLV TYLRGTMHLG TAVSANTVTN FMGTSFMLCL LGGFIADTFL
101: GRYLTIAIFA AVQASGVTIL TISTVVRGLR PPACSDLAAG GCVKASGTQL AVLYLALYLT ALGTGGLKSS VSGFGSDQFD ETNRREKVQM MKFFNWFFFF
201: ISLGSLVAVT VLVYIQDNLG RQWGYGLCAA AIGLGLVLFL SGTRRYRFKK LVGSPLTQIA AVMVAAWRKR GLELPSDPSL LHDIDEKQTA APGAEKGSKK
301: SSAKQRLPRT KQFRCLDRAA IDVNLSTAKP TKWQLATLTD VEEVKIVIRM LPIWATTIMF WTVYAQMTTF SVSQATTMDR RIGRSFRIPP GSLTVFFVGS
401: ILLTRMGVGL VMSILAMVAA ALIEIKRLRV ARANAASMEK GATVPVSVFW LVPQFFLVGS GEAFTYIGQL DFFLRECPKG MKTMSTGLFL STLSLGFFVS
501: SVLVSVVHKV TGESGHGGWL TDNLNRGKLY NFYWLVAVLS SVNLVLYLVA AKWYVYKEQR AVVDDDSMAG VELTEEAYLI IASLLETLLT TDR
Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.