Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- peroxisome 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| OQU88438 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12110.1 | OQU88438 | AT1G30270.1 | 19766570 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024587_P001 | Maize | plasma membrane | 93.84 | 92.76 |
| Os08t0155400-01 | Rice | plasma membrane | 75.54 | 86.48 |
| TraesCS7D01G297000.1 | Wheat | plasma membrane | 86.69 | 86.4 |
| TraesCS7B01G201900.1 | Wheat | plasma membrane | 86.69 | 86.4 |
| TraesCS7A01G301700.1 | Wheat | plasma membrane | 86.69 | 86.4 |
| HORVU7Hr1G071600.2 | Barley | mitochondrion | 86.52 | 83.74 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 71.55 | 73.63 |
| GSMUA_Achr1P20240_001 | Banana | plasma membrane | 70.22 | 71.16 |
| PGSC0003DMT400012226 | Potato | cytosol, peroxisome, plasma membrane | 68.05 | 69.32 |
| Solyc08g078950.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 67.72 | 68.98 |
| EER91957 | Sorghum | plasma membrane | 67.55 | 68.24 |
| CDY30051 | Canola | cytosol, peroxisome, plasma membrane | 39.27 | 67.62 |
| OQU93471 | Sorghum | plasma membrane | 67.05 | 66.61 |
| PGSC0003DMT400032493 | Potato | cytosol, peroxisome, plasma membrane | 65.39 | 66.61 |
| GSMUA_Achr6P36750_001 | Banana | plasma membrane | 73.21 | 66.57 |
| Solyc08g007430.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 64.73 | 65.93 |
| VIT_02s0154g00260.t01 | Wine grape | plastid | 70.55 | 65.84 |
| KRH28055 | Soybean | plasma membrane | 63.89 | 65.53 |
| KRH04097 | Soybean | peroxisome | 64.73 | 65.49 |
| KRH77380 | Soybean | cytosol, plasma membrane, plastid | 63.73 | 65.36 |
| Bra019744.1-P | Field mustard | plasma membrane | 29.12 | 65.3 |
| CDY69100 | Canola | plasma membrane | 35.94 | 65.06 |
| Bra026991.1-P | Field mustard | plasma membrane | 62.73 | 64.01 |
| CDY15967 | Canola | plasma membrane | 61.06 | 63.94 |
| AT1G12110.1 | Thale cress | plasma membrane | 62.73 | 63.9 |
| Bra016789.1-P | Field mustard | plasma membrane | 62.56 | 63.73 |
| CDY26539 | Canola | plasma membrane | 60.73 | 63.59 |
| CDY21035 | Canola | plasma membrane | 60.73 | 63.48 |
| CDY31242 | Canola | plasma membrane | 60.4 | 63.13 |
| KRH57369 | Soybean | plasma membrane | 60.9 | 62.03 |
| Solyc06g060620.2.1 | Tomato | plasma membrane | 61.06 | 61.99 |
| PGSC0003DMT400035882 | Potato | plasma membrane | 60.57 | 61.49 |
| KXG32694 | Sorghum | cytosol | 53.24 | 54.51 |
| EES05323 | Sorghum | plasma membrane | 50.92 | 51.26 |
| EER89980 | Sorghum | plasma membrane | 37.94 | 37.87 |
| EES12219 | Sorghum | plasma membrane | 36.77 | 37.52 |
| EES15876 | Sorghum | plasma membrane | 33.61 | 35.94 |
| KXG24751 | Sorghum | peroxisome, plasma membrane, vacuole | 35.77 | 35.71 |
| OQU87541 | Sorghum | cytosol, peroxisome, plasma membrane | 36.27 | 35.56 |
| OQU83190 | Sorghum | plasma membrane | 33.44 | 35.51 |
| EES15875 | Sorghum | plasma membrane | 33.11 | 34.97 |
| EES15877 | Sorghum | plasma membrane | 33.11 | 34.79 |
| OQU83318 | Sorghum | mitochondrion, plasma membrane | 29.28 | 34.31 |
| OQU81851 | Sorghum | plasma membrane | 32.11 | 34.28 |
| OQU81850 | Sorghum | plasma membrane | 31.11 | 34.0 |
| KXG28299 | Sorghum | plasma membrane | 31.78 | 33.1 |
| KXG26617 | Sorghum | plasma membrane | 32.28 | 32.94 |
| EES00465 | Sorghum | plastid | 35.27 | 31.78 |
| EES14657 | Sorghum | plasma membrane | 28.29 | 29.82 |
| EES11151 | Sorghum | plasma membrane | 28.79 | 29.73 |
| EES19057 | Sorghum | plastid | 11.48 | 27.6 |
| EES12425 | Sorghum | plasma membrane | 24.13 | 26.65 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | EntrezGene:8067856 | UniProt:C5YGZ1 | EnsemblPlants:EES13374 | ProteinID:EES13374 |
| ProteinID:EES13374.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006857 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:MFS_trans_sf |
| PFAM:PF00854 | InterPro:POT_fam | ScanProsite:PS01022 | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF78 | InterPro:PTR2_symporter_CS |
| EnsemblPlantsGene:SORBI_3007G044300 | SUPFAM:SSF103473 | unigene:Sbi.4885 | TMHMM:TMhelix | UniParc:UPI0001A873EF | RefSeq:XP_002443879.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:4494031..4502775
Molecular Weight (calculated)
64879.2 Da
IEP (calculated)
9.228
GRAVY (calculated)
0.347
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGLLPETNA AAETDVLLDA WDFKGRPAPR ATTGRWGAAA MILVAELNER LTTLGIAVNL VTYLTGTMHL GNAESANVVT NFMGTSFMLC LLGGFVADSF
101: LGRYLTIAIF TAIQASGVTI LTISTAAPGL RPAACSANAG DGECARASGA QLGVMYLALY LTALGTGGLK SSVSGFGSDQ FDESDRGEKH QMMRFFNWFF
201: FFISLGSLLA VTVLVYVQDN LGRRWGYGAC ACAIAAGLVI FLAGTRRYRF KKLVGSPLTQ IAAVVVAAWR KRRLPLPADP AMLYDIDVGK AAAVEEGSGK
301: KSKRKERLPH TDQFRFLDHA AINEEPAAQP SKWRLSTLTD VEEVKTVVRM LPIWATTIMF WTVYAQMTTF SVSQATTMDR HIGSSFQIPA GSLTVFFVGS
401: ILLTVPVYDR IVVPVARRVS GNPHGLTPLQ RIGVGLALSV IAMAGAALTE IKRLHVARDA AVPAGGVVPM SVFWLIPQFF LVGAGEAFTY IGQLDFFLRE
501: CPKGMKTMST GLFLSTLSLG FFVSSALVAA VHKVTGDRHP WIADDLNKGR LDNFYWLLAV ICLANLLVYL VAARWYKYKA GRPGADGSVN GVEMADEPML
601: H
101: LGRYLTIAIF TAIQASGVTI LTISTAAPGL RPAACSANAG DGECARASGA QLGVMYLALY LTALGTGGLK SSVSGFGSDQ FDESDRGEKH QMMRFFNWFF
201: FFISLGSLLA VTVLVYVQDN LGRRWGYGAC ACAIAAGLVI FLAGTRRYRF KKLVGSPLTQ IAAVVVAAWR KRRLPLPADP AMLYDIDVGK AAAVEEGSGK
301: KSKRKERLPH TDQFRFLDHA AINEEPAAQP SKWRLSTLTD VEEVKTVVRM LPIWATTIMF WTVYAQMTTF SVSQATTMDR HIGSSFQIPA GSLTVFFVGS
401: ILLTVPVYDR IVVPVARRVS GNPHGLTPLQ RIGVGLALSV IAMAGAALTE IKRLHVARDA AVPAGGVVPM SVFWLIPQFF LVGAGEAFTY IGQLDFFLRE
501: CPKGMKTMST GLFLSTLSLG FFVSSALVAA VHKVTGDRHP WIADDLNKGR LDNFYWLLAV ICLANLLVYL VAARWYKYKA GRPGADGSVN GVEMADEPML
601: H
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.