Factsheet for AT1G12110.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21035	Canola	plasma membrane	90.34	92.7
Bra016789.1-P	Field mustard	plasma membrane	92.37	92.37
CDY31242	Canola	plasma membrane	90.0	92.35
CDY30051	Canola	cytosol, peroxisome, plasma membrane	54.58	92.26
CDY15967	Canola	plasma membrane	89.15	91.64
CDY26539	Canola	plasma membrane	88.98	91.46
Bra026991.1-P	Field mustard	plasma membrane	91.02	91.17
Bra019744.1-P	Field mustard	plasma membrane	40.68	89.55
CDY69100	Canola	plasma membrane	50.34	89.46
PGSC0003DMT400032493	Potato	cytosol, peroxisome, plasma membrane	66.95	66.95
PGSC0003DMT400012226	Potato	cytosol, peroxisome, plasma membrane	66.95	66.95
Solyc08g078950.2.1	Tomato	cytosol, peroxisome, plasma membrane	66.78	66.78
Solyc08g007430.1.1	Tomato	cytosol, peroxisome, plasma membrane	66.27	66.27
GSMUA_Achr8P11180_001	Banana	peroxisome	61.02	63.27
KRH28055	Soybean	plasma membrane	62.54	62.97
EES13374	Sorghum	plasma membrane	63.9	62.73
KRH77380	Soybean	cytosol, plasma membrane, plastid	62.03	62.46
GSMUA_Achr8P11190_001	Banana	peroxisome	59.66	62.3
GSMUA_Achr11P...	Banana	plasma membrane	59.83	62.26
EER91957	Sorghum	plasma membrane	62.03	61.51
Zm00001d024587_P001	Maize	plasma membrane	63.22	61.35
Zm00001d029932_P001	Maize	plasma membrane	61.69	61.18
Os08t0155400-01	Rice	plasma membrane	54.41	61.14
TraesCS7B01G201900.1	Wheat	plasma membrane	62.2	60.86
TraesCS7D01G297000.1	Wheat	plasma membrane	62.2	60.86
VIT_02s0154g00260.t01	Wine grape	plastid	66.27	60.71
TraesCS7A01G301700.1	Wheat	plasma membrane	62.03	60.7
Solyc06g060620.2.1	Tomato	plasma membrane	60.85	60.64
Os10t0554200-02	Rice	plasma membrane	61.19	60.57
GSMUA_Achr1P20240_001	Banana	plasma membrane	60.85	60.54
TraesCS1D01G214200.1	Wheat	plasma membrane	61.02	60.4
Zm00001d029933_P001	Maize	cytosol, peroxisome, plasma membrane	60.17	60.37
PGSC0003DMT400035882	Potato	plasma membrane	60.51	60.3
TraesCS1B01G224900.1	Wheat	plasma membrane	60.85	60.23
KRH04097	Soybean	peroxisome	60.34	59.93
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	58.81	59.42
TraesCS1B01G225000.1	Wheat	plasma membrane	59.83	59.33
TraesCS1A01G211000.1	Wheat	cytosol	59.83	59.33
GSMUA_Achr11P...	Banana	peroxisome	56.61	59.33
TraesCS1D01G214300.1	Wheat	plasma membrane	59.49	58.99
TraesCS5A01G537100.1	Wheat	peroxisome	60.85	58.95
HORVU7Hr1G071600.2	Barley	mitochondrion	62.03	58.94
TraesCS4D01G361500.1	Wheat	peroxisome	60.51	58.91
HORVU1Hr1G053990.4	Barley	peroxisome	61.36	58.67
TraesCS4B01G371000.1	Wheat	peroxisome	59.49	58.21
TraesCS4B01G375800.1	Wheat	plasma membrane	59.83	58.15
TraesCS1A01G210900.1	Wheat	plasma membrane	47.46	57.97
OQU93471	Sorghum	plasma membrane	59.32	57.85
Os03t0103000-01	Rice	cytosol, peroxisome, plasma membrane	57.29	57.39
Zm00001d027285_P001	Maize	cytosol, plasma membrane, vacuole	58.31	57.33
HORVU4Hr1G088020.4	Barley	nucleus, plasma membrane	60.34	57.33
KRH57369	Soybean	plasma membrane	56.95	56.95
GSMUA_Achr6P36750_001	Banana	plasma membrane	61.53	54.92
AT2G26690.1	Thale cress	plasma membrane	51.69	52.86
AT3G21670.1	Thale cress	plasma membrane	46.61	46.61
HORVU1Hr1G054020.3	Barley	mitochondrion, peroxisome, plastid	42.54	45.97
AT1G27040.1	Thale cress	plasma membrane	34.75	36.16
AT3G25280.1	Thale cress	plasma membrane	31.69	35.89
AT1G59740.1	Thale cress	plasma membrane	35.76	35.7
AT3G25260.1	Thale cress	plasma membrane	31.02	35.53
AT1G69850.1	Thale cress	plasma membrane	34.92	35.21
AT1G33440.1	Thale cress	plasma membrane	34.75	34.11
AT5G13400.1	Thale cress	plasma membrane	34.07	32.21
AT5G62730.1	Thale cress	plasma membrane	32.03	32.09

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	PDB:4OH3	PDB:5A2N	PDB:5A2O	EntrezGene:837763
UniProt:A0A178W8F7	ProteinID:AAC17604.1	ProteinID:AEE28838.1	EMBL:AK317498	ArrayExpress:AT1G12110	EnsemblPlantsGene:AT1G12110
RefSeq:AT1G12110	TAIR:AT1G12110	RefSeq:AT1G12110-TAIR-G	EnsemblPlants:AT1G12110.1	TAIR:AT1G12110.1	Unigene:At.19624
EMBL:BT002016	EMBL:BT008783	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006857	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009414	GO:GO:0009628
GO:GO:0009635	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	GO:GO:0010167	GO:GO:0015112
GO:GO:0015293	GO:GO:0015706	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0042128
GO:GO:0055085	EMBL:L10357	InterPro:MFS_trans_sf	RefSeq:NP_563899.1	Symbol:NRT1.1	ProteinID:OAP14456.1
PFAM:PF00854	PO:PO:0000013	PO:PO:0000016	PO:PO:0000026	PO:PO:0000027	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PO:PO:0025374	InterPro:POT_fam	ScanProsite:PS01022	ScanProsite:PS01023
PANTHER:PTHR11654	PANTHER:PTHR11654:SF78	InterPro:PTR2_symporter_CS	UniProt:Q05085	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI0000001B12	SEG:seg	:	:	:	:

Description

NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]

Coordinates

chr1:+:4105223..4109601

Molecular Weight (calculated)

64925.6 Da

IEP (calculated)

8.570

GRAVY (calculated)

0.358

Length

590 amino acids

Sequence
(BLAST)

001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.