Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010117.1-P | Field mustard | plasma membrane | 84.89 | 90.09 |
| CDY00323 | Canola | plasma membrane | 86.25 | 90.07 |
| CDX84348 | Canola | plasma membrane | 86.08 | 89.89 |
| KRH03418 | Soybean | plasma membrane | 64.35 | 65.12 |
| KRH56961 | Soybean | plasma membrane | 64.01 | 64.67 |
| AT1G27040.1 | Thale cress | plasma membrane | 59.42 | 61.73 |
| GSMUA_Achr7P08880_001 | Banana | plasma membrane | 57.89 | 61.66 |
| VIT_17s0000g05640.t01 | Wine grape | cytosol, plasma membrane, plastid | 63.84 | 61.64 |
| AT1G69850.1 | Thale cress | plasma membrane | 60.95 | 61.37 |
| PGSC0003DMT400065182 | Potato | plasma membrane | 60.1 | 60.1 |
| Zm00001d046383_P001 | Maize | plasma membrane | 60.1 | 59.8 |
| Os06t0581000-01 | Rice | plasma membrane | 59.76 | 59.66 |
| EER89980 | Sorghum | plasma membrane | 60.1 | 58.8 |
| TraesCS7A01G365100.1 | Wheat | plasma membrane | 58.4 | 58.6 |
| Zm00001d036942_P001 | Maize | plasma membrane | 52.63 | 57.41 |
| GSMUA_Achr2P16840_001 | Banana | plasma membrane, plastid | 58.06 | 56.72 |
| Zm00001d036941_P001 | Maize | plasma membrane | 58.4 | 56.49 |
| TraesCS7D01G357300.2 | Wheat | plasma membrane | 58.06 | 55.34 |
| GSMUA_Achr6P00820_001 | Banana | plasma membrane | 58.4 | 54.43 |
| HORVU7Hr1G086170.5 | Barley | cytosol, peroxisome, plastid | 58.23 | 54.36 |
| Solyc03g113250.2.1 | Tomato | plasma membrane | 54.84 | 52.95 |
| TraesCS7B01G262200.1 | Wheat | plasma membrane, plastid | 58.57 | 50.0 |
| AT3G25260.1 | Thale cress | plasma membrane | 35.48 | 40.58 |
| AT3G25280.1 | Thale cress | plasma membrane | 35.82 | 40.5 |
| AT1G33440.1 | Thale cress | plasma membrane | 36.16 | 35.44 |
| AT1G59740.1 | Thale cress | plasma membrane | 35.48 | 35.36 |
| AT2G26690.1 | Thale cress | plasma membrane | 33.45 | 34.14 |
| AT3G21670.1 | Thale cress | plasma membrane | 32.6 | 32.54 |
| AT1G12110.1 | Thale cress | plasma membrane | 32.09 | 32.03 |
| AT5G13400.1 | Thale cress | plasma membrane | 28.86 | 27.24 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:11.1.4.1 | MapMan:24.2.2.9 | EntrezGene:836394 | ProteinID:AED97648.1 | ArrayExpress:AT5G62730 |
| EnsemblPlantsGene:AT5G62730 | RefSeq:AT5G62730 | TAIR:AT5G62730 | RefSeq:AT5G62730-TAIR-G | EnsemblPlants:AT5G62730.1 | TAIR:AT5G62730.1 |
| ProteinID:BAB10842.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | InterPro:MFS_dom |
| InterPro:MFS_trans_sf | RefSeq:NP_201079.1 | PFAM:PF00854 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | InterPro:POT_fam |
| PANTHER:PTHR11654 | PANTHER:PTHR11654:SF184 | UniProt:Q9FM20 | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0000048CCD |
| SEG:seg | : | : | : | : | : |
Description
NPF4.7Protein NRT1/ PTR FAMILY 4.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM20]
Coordinates
chr5:+:25197461..25200386
Molecular Weight (calculated)
65246.4 Da
IEP (calculated)
8.574
GRAVY (calculated)
0.369
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTNYTAINH ILHFHSPNSC FLMIMSLEFE QMDEANRLSA WNGYVDWRSR PALRGRHGGM LAASFVLVVE VLENLAFLAN ASNLVLYLST KMGFSPSGAA
101: NAVTAFMGTA FFLALLGGFL ADAFFTTFHI YLVSAAIEFL GLMVLTVQAH EHSTEPWSRV FLFVGLYLVA LGVGGIKGSL PPHGAEQFDE ETSSGRRQRS
201: FFFNYFIFSL SCGALIAVTV VVWLEDNKGW SYGFGVSTAA ILISVPVFLA GSRVYRLKVP SGSPITTLFK VLTAALYAKY KKRRTSRIVV TCHTRNDCDD
301: SVTKQNCDGD DGFLGSFLGE VVRERESLPR PLRCTEEQVK DVKIVIKILP IFMSTIMLNC CLAQLSTFSV QQASTMNTKL GSFTVPPAAL PVFPVVFMMI
401: LAPTYNHLLL PLARKSTKTE TGITHLQRIG TGLVLSIVAM AVAALVETKR KHVVVSCCSN NNSSSYSSSP LPITFLWVAI QYVFLGSADL FTLAGMMEFF
501: FTEAPSTMRS LATSLSWASL AMGYYFSSVL VSAVNFVTGL NHHNPWLLGE NLNQYHLERF YWLMCVLSGI NFLHYLFWAS RYVYRSNQG
101: NAVTAFMGTA FFLALLGGFL ADAFFTTFHI YLVSAAIEFL GLMVLTVQAH EHSTEPWSRV FLFVGLYLVA LGVGGIKGSL PPHGAEQFDE ETSSGRRQRS
201: FFFNYFIFSL SCGALIAVTV VVWLEDNKGW SYGFGVSTAA ILISVPVFLA GSRVYRLKVP SGSPITTLFK VLTAALYAKY KKRRTSRIVV TCHTRNDCDD
301: SVTKQNCDGD DGFLGSFLGE VVRERESLPR PLRCTEEQVK DVKIVIKILP IFMSTIMLNC CLAQLSTFSV QQASTMNTKL GSFTVPPAAL PVFPVVFMMI
401: LAPTYNHLLL PLARKSTKTE TGITHLQRIG TGLVLSIVAM AVAALVETKR KHVVVSCCSN NNSSSYSSSP LPITFLWVAI QYVFLGSADL FTLAGMMEFF
501: FTEAPSTMRS LATSLSWASL AMGYYFSSVL VSAVNFVTGL NHHNPWLLGE NLNQYHLERF YWLMCVLSGI NFLHYLFWAS RYVYRSNQG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.